DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Uxs and tdh2

DIOPT Version :9

Sequence 1:NP_648182.1 Gene:Uxs / 38911 FlyBaseID:FBgn0035848 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_001092887.1 Gene:tdh2 / 556781 ZFINID:ZDB-GENE-070620-14 Length:363 Species:Danio rerio


Alignment Length:361 Identity:82/361 - (22%)
Similarity:118/361 - (32%) Gaps:135/361 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 RILITGGAGFVGSHLVDDLMVQ-GHEVIVVDNFFTGRKRNVEHW----------LGHENFE---- 166
            |:|||||.|.:|..|...|..| |.|.|::.:.   |:...|.:          |.::|..    
Zfish    45 RVLITGGLGQLGVGLAQMLRQQYGKENIILSDI---RRPPTEVYNMGPFVYADVLDYKNLRELVV 106

  Fly   167 ------LIHHDIVNPLFIEIDEIYHLASPASPPHYMYNPVKTIKTNTMGTINVLGLAKRVMAKVL 225
                  |:|:   :.|...|.|    |:.|.        .:||  |..|..|||.||.....::.
Zfish   107 NNRITWLVHY---SALLSAIGE----ANVAL--------ARTI--NITGLHNVLDLALENCLRLF 154

  Fly   226 IASTSEVYG-----DPTVH---PQPETYWG----HVNPIG----------------PRACYDEGK 262
            :.||...:|     ||...   .:|.|.:|    |...:|                |.......|
Zfish   155 VPSTIGAFGPSSPRDPAPDLCIQRPRTIYGVSKVHAELMGEYLHHKYGLDFRCLRYPGVVSAHTK 219

  Fly   263 RVSETLSYAYAKQEKVQVRVARIF---------------NTYGPRMHMNDGRVVSNFILQALRNE 312
            ....|..||           .:||               ||..|.||::|....:...:||    
Zfish   220 PGGGTTDYA-----------VQIFHDALSTGHHECYLRPNTRLPMMHISDCHRATIEFMQA---- 269

  Fly   313 TITVYGNGKQTRSFQYVSDLVDGMIALMASNYTQPVNLGNPVEQTIGEFAEIIKKLVG------G 371
                                .:..::|...|..       .:..|.||.||.|:||:.      .
Zfish   270 --------------------PESCLSLRTYNIA-------AMSFTPGEVAEEIRKLLPHLRVTYN 307

  Fly   372 PSVIKQSKAMEDDPQRRKPDITRARQLLHWEPKVPL 407
            |..|:| |..:..|.|.  |.:.|||...|:|...|
Zfish   308 PDAIRQ-KIADSWPVRF--DDSNARQDWGWKPAFSL 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UxsNP_648182.1 WcaG 116..424 CDD:223528 82/361 (23%)
UGD_SDR_e 116..419 CDD:187541 82/361 (23%)
tdh2NP_001092887.1 TDH_SDR_e 45..351 CDD:187580 82/361 (23%)
WcaG 60..355 CDD:223528 73/346 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0451
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.