DRSC/TRiP Functional Genomics Resources

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Protein Alignment Uxs and SPBPB2B2.11

DIOPT Version :9

Sequence 1:NP_648182.1 Gene:Uxs / 38911 FlyBaseID:FBgn0035848 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_596857.1 Gene:SPBPB2B2.11 / 2541398 PomBaseID:SPBPB2B2.11 Length:365 Species:Schizosaccharomyces pombe


Alignment Length:371 Identity:91/371 - (24%)
Similarity:153/371 - (41%) Gaps:72/371 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   109 YLNYKNRKRILITGGAGFVGSHLVD---DLMVQGH-----EVIVVDNFFTGRKRNVEHWLGHENF 165
            |..||.  ..||||||||:||:.:|   |.....|     ::..|.|:.|.....|   |...||
pombe     5 YKEYKG--YALITGGAGFIGSNFLDYAVDKYPDFHFTCIDKLSYVSNYTTVFLSKV---LNQPNF 64

  Fly   166 ELIHHDI-VNPLFI--------EIDEIYHL---ASPASPPHYMYNPVKTIKTNTMGTINVLGLAK 218
            ..:..|: .|..|:        ||::|.|:   |:.:|......:|:...|.|.:.|.|:|...:
pombe    65 RFLEMDLATNYKFLYQFMVEDSEINKITHIINFAAESSVDRSFIDPLYFTKNNILSTQNLLECVR 129

  Fly   219 RVMAK---------VLIASTSEVYGDPTVHPQPETYWGHVNPIGPRACYDEGKRVSETLSYAYAK 274
            .::.|         .:..||.||||:...:...:.. ..:||..|   |...|...:.:..:|..
pombe   130 ILLGKKEELRNRLNFVHVSTDEVYGEQDENASVDEK-SKLNPTSP---YAASKAAVDLIIQSYRY 190

  Fly   275 QEKVQVRVARIFNTYGPRMH------MNDGRVVSNFI---LQALRNETITVYGNGKQTRSFQYVS 330
            ..|:.|.|.|..|.||||.:      |..|: :..||   .|.:..:.||::|:|...|.:.::.
pombe   191 SYKISVTVIRANNVYGPRQYEEKLIPMTLGK-LKKFINQKSQKIMQDKITLHGDGLHKRKYLHIY 254

  Fly   331 DLVDGM-------------IALMASNYTQPVNLGNPVE-------QTIGEFAEIIKKLVGGPSVI 375
            |.::.:             ..|.:....|..|:|:..|       :.|.::....|..:......
pombe   255 DFINAIDLVWMKQGSEVYHSTLESKMSGQIFNIGSDDEIDNLSLVKFICDYFLYRKLSLKNLDYS 319

  Fly   376 KQSKAMED---DPQRRKPDITRARQLLHWEPKVPLETGLQRTISYF 418
            |....::|   :..|...:..:.:. |.|.|::||||||::.|..:
pombe   320 KYITFVQDRNYNDSRYSLNYEKIKS-LGWRPQIPLETGLRKLIDEY 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UxsNP_648182.1 WcaG 116..424 CDD:223528 88/364 (24%)
UGD_SDR_e 116..419 CDD:187541 88/364 (24%)
SPBPB2B2.11NP_596857.1 RfbB 11..365 CDD:224013 88/363 (24%)
NADB_Rossmann 13..364 CDD:304358 88/359 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1867
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.940

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