DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Uxs and F08F3.4

DIOPT Version :9

Sequence 1:NP_648182.1 Gene:Uxs / 38911 FlyBaseID:FBgn0035848 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_504433.2 Gene:F08F3.4 / 178924 WormBaseID:WBGene00017262 Length:358 Species:Caenorhabditis elegans


Alignment Length:370 Identity:86/370 - (23%)
Similarity:140/370 - (37%) Gaps:59/370 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 LQRTRENLARL--EEQVRSLQTSTPRKYPKVKYLNYKNRKRILITGGAGFVGSHL--VDDLMVQG 139
            :...|.|.:.|  :..:|....|..:|.|           |:||||..|.:|..|  |...| .|
 Worm    10 IHNARRNYSPLPVDPLLRFKTISQTQKAP-----------RVLITGSLGQLGRGLNSVYKYM-YG 62

  Fly   140 HEVIVVDNF--FTGRKRNVE--HWLGHENFELIHHDIVNPLFIEIDEIYHLASPASPPHYMYNPV 200
            .|.:|:.:.  ......:|.  ::|...|...|...:||.   .||.|.|.::..|.......|:
 Worm    63 SECVVMSDIVRLPANATDVSDYNYLDILNQGSIEEIVVNK---NIDTIVHFSALLSAVGETNVPL 124

  Fly   201 KTIKTNTMGTINVLGLAKRVMAKVLIASTSEVYGDPTVHPQPETYWGHVNPIGPRACYDEGKRVS 265
             .::.|..|..|:|.:|.:...||.|.||...:|..|  |:..|  ..:....|...|...|..:
 Worm   125 -ALQVNCRGVENILQVAAKHKLKVFIPSTIGAFGPTT--PRENT--PDLTVQCPTTIYGVSKVYA 184

  Fly   266 ETLSYAYAKQEKVQVRVAR---IFNTYGPRMHMNDGRVVSNFILQ----ALRNETITVYGNGKQT 323
            |.|...:..:..|..|..|   |.:...|      |...:::.:|    ||:....|.|......
 Worm   185 ERLGEYFNHRFGVDFRSMRFPGIISATKP------GGGTTDYAIQIFYDALQKGKHTCYLRPDTR 243

  Fly   324 RSFQYVSDLVDGMIALMASNYTQPVNLGNPVEQTIG------EFAEIIKKLVGGPSV------IK 376
            ....|.:|.:..:|.|:|::   ..:|........|      |.|:.|::::.|..:      .:
 Worm   244 LPMMYDTDCMASVIQLLAAD---SQSLKRRTYNVTGFSFTPEEIADAIRRVMPGFEIDYDICPTR 305

  Fly   377 QSKAMEDDPQRRKPDITRARQLLHWEPKVPLETGLQRTISYFRNE 421
            ||.|   |......|.:.||:...|.|:..|:..:|...:..|.|
 Worm   306 QSIA---DSWPMSLDDSEARKDWGWNPEYGLDETVQVMFALLRRE 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UxsNP_648182.1 WcaG 116..424 CDD:223528 79/331 (24%)
UGD_SDR_e 116..419 CDD:187541 77/327 (24%)
F08F3.4NP_504433.2 TDH_SDR_e 39..344 CDD:187580 77/325 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0451
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.