DRSC/TRiP Functional Genomics Resources

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Protein Alignment Uxs and sqv-1

DIOPT Version :9

Sequence 1:NP_648182.1 Gene:Uxs / 38911 FlyBaseID:FBgn0035848 Length:441 Species:Drosophila melanogaster
Sequence 2:NP_501418.1 Gene:sqv-1 / 177631 WormBaseID:WBGene00005019 Length:467 Species:Caenorhabditis elegans


Alignment Length:376 Identity:243/376 - (64%)
Similarity:303/376 - (80%) Gaps:4/376 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 TESPLQRSLQMAYEEQSSLIREQKAELQRTRENLARLEEQVRSLQTSTPRKYPKVKYLNYKNRKR 117
            |.|.|...:::..:|.||: |.:..:.:....|.|..:|.|..|.|:  :.:|.|:|.|.:.|||
 Worm    77 TVSSLLERIKLLEDELSSM-RTRMDDAENREGNAANGDEIVAPLPTT--KSFPSVRYRNEETRKR 138

  Fly   118 ILITGGAGFVGSHLVDDLMVQGHEVIVVDNFFTGRKRNVEHWLGHENFELIHHDIVNPLFIEIDE 182
            ||||||||||||||||.||:.|||||.:||:|||||:|||||:||.|||::|||:|||.|:|:|:
 Worm   139 ILITGGAGFVGSHLVDKLMLDGHEVIALDNYFTGRKKNVEHWIGHPNFEMVHHDVVNPYFVEVDQ 203

  Fly   183 IYHLASPASPPHYMYNPVKTIKTNTMGTINVLGLAKRVMAKVLIASTSEVYGDPTVHPQPETYWG 247
            |||||||||||||||||||||||||:||||:|||||||.|.||:||||||||||.||||||||||
 Worm   204 IYHLASPASPPHYMYNPVKTIKTNTLGTINMLGLAKRVKATVLLASTSEVYGDPEVHPQPETYWG 268

  Fly   248 HVNPIGPRACYDEGKRVSETLSYAYAKQEKVQVRVARIFNTYGPRMHMNDGRVVSNFILQALRNE 312
            |||.|||||||||||||:|:|..||.|||.:::|:||||||:||||||||||||||||:|||:::
 Worm   269 HVNTIGPRACYDEGKRVAESLMVAYNKQENIKIRIARIFNTFGPRMHMNDGRVVSNFIIQALQDK 333

  Fly   313 TITVYGNGKQTRSFQYVSDLVDGMIALMASNYTQPVNLGNPVEQTIGEFAEIIKKLV-GGPSVIK 376
            .||:||||.||||||||:|||||:|.||.|||:.|||:|||.|.|||:||.||:.|| |..|.|.
 Worm   334 PITIYGNGTQTRSFQYVTDLVDGLIKLMNSNYSLPVNIGNPEEHTIGQFATIIRDLVPGSTSEIV 398

  Fly   377 QSKAMEDDPQRRKPDITRARQLLHWEPKVPLETGLQRTISYFRNELARSDR 427
            ..::.:||||:|:|||.||.:.:.|.|:|.::.||.:|:.|||.|:.|:.|
 Worm   399 NLESQQDDPQQRRPDIRRAAEQISWAPQVHMKDGLLKTVDYFRAEIDRNKR 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UxsNP_648182.1 WcaG 116..424 CDD:223528 223/308 (72%)
UGD_SDR_e 116..419 CDD:187541 220/303 (73%)
sqv-1NP_501418.1 UGD_SDR_e 137..441 CDD:187541 220/303 (73%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160160071
Domainoid 1 1.000 466 1.000 Domainoid score I224
eggNOG 1 0.900 - - E1_COG0451
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H41609
Inparanoid 1 1.050 507 1.000 Inparanoid score I725
Isobase 1 0.950 - 0.946395 Normalized mean entropy S1822
OMA 1 1.010 - - QHG61048
OrthoDB 1 1.010 - - D289613at33208
OrthoFinder 1 1.000 - - FOG0002011
OrthoInspector 1 1.000 - - oto17646
orthoMCL 1 0.900 - - OOG6_100713
Panther 1 1.100 - - LDO PTHR43078
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1867
SonicParanoid 1 1.000 - - X1322
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1716.790

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