DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Uxs and tgds

DIOPT Version :9

Sequence 1:NP_648182.1 Gene:Uxs / 38911 FlyBaseID:FBgn0035848 Length:441 Species:Drosophila melanogaster
Sequence 2:XP_002939327.3 Gene:tgds / 100490782 XenbaseID:XB-GENE-946482 Length:349 Species:Xenopus tropicalis


Alignment Length:339 Identity:97/339 - (28%)
Similarity:154/339 - (45%) Gaps:37/339 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly   116 KRILITGGAGFVGSHLVDDLMVQGHEVIVV--DNF-FTGRKRNVEHWLGHENFELIHHDIVNPLF 177
            ||||:||||||:.||::..|:....:.:::  |.. :....:|:|....|.|::.|..||.:|.|
 Frog    15 KRILVTGGAGFIASHMIISLVENYPDYLIINLDKLDYCASLKNLESISSHPNYKFIQGDICDPDF 79

  Fly   178 IE-------IDEIYHLASPASPPHYMYNPVKTIKTNTMGTINVLGLAKRV-MAKVLIASTSEVYG 234
            |:       ::.|.|.|:............|....||.||..:|..|... :.|.:..||.||||
 Frog    80 IKLVFEKENLNIILHFAAQTHVDLSFLQSFKFAYVNTYGTSILLNAAHGAGVEKFVYISTDEVYG 144

  Fly   235 DPTVHPQPETYWGHVNPIGPRACYDEGKRVSETLSYAYAKQEKVQVRVARIFNTYGPRMHMNDGR 299
            ........|:     :|..|...|...|..:|:...::.:|.|..|.:.|..|.|||  |....:
 Frog   145 GSLNEEFDES-----SPKRPTNPYASSKAAAESFVLSFWEQHKFPVVITRSSNVYGP--HQYPEK 202

  Fly   300 VVSNFILQALRNETITVYGNGKQTRSFQYVSDLVDGMIALMASNYTQPV-NLGNPVEQTIGEFA- 362
            |:..||....||:...::|:|:|||.|.|.||:||.:|.::.......| |:|...|.::.:.| 
 Frog   203 VIPKFISLLQRNQKCCIHGSGRQTRHFLYASDVVDALITILTRGEIGEVYNIGASFEISVSQLAR 267

  Fly   363 EIIKKLVGGPS--------VIKQSKAMEDDPQRRKPDITRARQLLHWEPKVPLETGLQRTISYFR 419
            |:|:.:....|        |....:.:.|.....|.:...:   |.|.|||..:.|:||||.:::
 Frog   268 ELIQTMKNTASESEIENWIVYVNDRPVNDLRYSMKSEKMHS---LGWRPKVHWKEGIQRTIEWYK 329

  Fly   420 NELARSDRFQESSN 433
                  |.|....|
 Frog   330 ------DNFHNWQN 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
UxsNP_648182.1 WcaG 116..424 CDD:223528 94/328 (29%)
UGD_SDR_e 116..419 CDD:187541 94/323 (29%)
tgdsXP_002939327.3 dTDP_GD_SDR_e 15..333 CDD:187557 95/333 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D289613at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

Return to query results.
Submit another query.