DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mthl7 and Pdfr

DIOPT Version :10

Sequence 1:NP_648181.2 Gene:mthl7 / 38910 FlyBaseID:FBgn0035847 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_001245501.1 Gene:Pdfr / 31234 FlyBaseID:FBgn0260753 Length:738 Species:Drosophila melanogaster


Alignment Length:264 Identity:55/264 - (20%)
Similarity:100/264 - (37%) Gaps:89/264 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   222 SLEI--LIITMICFVLTIAVYLYIKKLRNVTGKCIVCCIVSRFIQCLIMILDHLNLLNGICSPAG 284
            :|||  |.:::...::::.::...:.|||...|    ...:.|:..::.::..|.|         
  Fly   311 TLEIVGLCLSLFALIVSLLIFCTFRSLRNNRTK----IHKNLFVAMVLQVIIRLTL--------- 362

  Fly   285 YSSHFFR----MASNLWLSVISYHTWKVLTSLNRVDPNYRFLRY---NAFVWS-----------T 331
            |...|.|    .|:|..||||....:       ..:.:|..|.|   ..|:|.           |
  Fly   363 YLDQFRRGNKEAATNTSLSVIENTPY-------LCEASYVLLEYARTAMFMWMFIEGLYLHNMVT 420

  Fly   332 AAIMTGSIYIVNQIWENDP----SKWNW-LPLV---GFIRCSVKD---------WH----PSVWI 375
            .|:..||.          |    |:..| :|::   .:.||:|..         |:    |..||
  Fly   421 VAVFQGSF----------PLKFFSRLGWCVPILMTTVWARCTVMYMDTSLGECLWNYNLTPYYWI 475

  Fly   376 YISGPSLALSTFNVAMFALTAIYIRKVKGGINKFTNEEEGRINCINFDSQTYLQFLRLSIV---- 436
             :.||.||:...|.. |.:..|.:..:|...::.::.|:.|            :.:|.:||    
  Fly   476 -LEGPRLAVILLNFC-FLVNIIRVLVMKLRQSQASDIEQTR------------KAVRAAIVLLPL 526

  Fly   437 MGLT 440
            :|:|
  Fly   527 LGIT 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl7NP_648181.2 Mth_Ecto 27..214 CDD:448329
7tmB3_Methuselah-like 226..489 CDD:410632 52/258 (20%)
TM helix 2 251..271 CDD:410632 2/19 (11%)
TM helix 3 281..308 CDD:410632 9/30 (30%)
TM helix 4 321..341 CDD:410632 8/33 (24%)
TM helix 5 369..399 CDD:410632 11/33 (33%)
TM helix 6 422..449 CDD:410632 5/23 (22%)
TM helix 7 457..482 CDD:410632
PdfrNP_001245501.1 HRM 213..272 CDD:397086
7tmB1_PDFR 306..584 CDD:320389 55/264 (21%)
TM helix 1 308..333 CDD:320389 4/21 (19%)
TM helix 2 342..364 CDD:320389 4/34 (12%)
TM helix 3 391..418 CDD:320389 5/26 (19%)
TM helix 4 430..450 CDD:320389 3/19 (16%)
TM helix 5 469..498 CDD:320389 10/30 (33%)
TM helix 6 512..539 CDD:320389 6/31 (19%)
TM helix 7 546..571 CDD:320389
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.