DRSC/TRiP Functional Genomics Resources

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Protein Alignment mthl7 and lat-1

DIOPT Version :9

Sequence 1:NP_648181.2 Gene:mthl7 / 38910 FlyBaseID:FBgn0035847 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_001366731.1 Gene:lat-1 / 174419 WormBaseID:WBGene00002251 Length:1014 Species:Caenorhabditis elegans


Alignment Length:273 Identity:60/273 - (21%)
Similarity:106/273 - (38%) Gaps:57/273 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   227 IITMICFVLTIAVYLYIKKLRNVTGKCIVCCIVSR------FIQ---CLIMILDHLNLLNGI--- 279
            ||::||.:||...||                |.||      ||.   ||.:.:..:..|.||   
 Worm   560 IISIICLLLTFFAYL----------------IFSRNGGDRVFIHENLCLSLAIAEITFLAGITRT 608

  Fly   280 -----CSPAGYSSHFFRMASNLWLSVISYHTWKVLTSLNRVDPNYRFLRYNAFVWSTAAIMTGSI 339
                 |.....:..:..:::..|:.:..||..::||.:...||  |...|....:...||:|...
 Worm   609 EDSLQCGIIAVALMYMFLSALTWMLLEGYHIHRMLTEVFPSDP--RRFTYLLVGYIPPAIITLVA 671

  Fly   340 YIVNQIWENDPSKWNWLPLVGFIRCSVKDWHPSVWIYISGPSLALSTFN--VAMFALTAIYIRKV 402
            |:.|......|.           .|.:...:..:| :.:||:..:...|  |.:..|..:| :..
 Worm   672 YLYNSDGFGTPD-----------HCWLSTQNNFIW-FFAGPACFIFCANSLVLVKTLCTVY-QHT 723

  Fly   403 KGGINKFTNEEEGRINCINFDSQTYLQFLRLSIVMGLTWIFNVIPYSARLHIFWEWVGIISEYFH 467
            .||.....::.:...:..|:...:    |.|:.::|:||||.:........|...:|..||   :
 Worm   724 SGGYLPCRHDVDSGRSIRNWVKGS----LALASLLGVTWIFGLFWVEDSRSIVMAYVFTIS---N 781

  Fly   468 SAFGIVLFVLLVL 480
            |..|:.:|:..|:
 Worm   782 SLQGLFIFLFHVV 794

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl7NP_648181.2 Mth_Ecto 27..214 CDD:299804
lat-1NP_001366731.1 Gal_Lectin 51..133 CDD:396628
HormR 180..244 CDD:214468
GAIN 258..462 CDD:406802
GPS 493..541 CDD:197639
7tmB2_latrophilin-like_invertebrate 548..808 CDD:320556 60/273 (22%)
TM helix 1 551..575 CDD:320556 8/30 (27%)
TM helix 2 584..605 CDD:320556 5/20 (25%)
TM helix 3 615..637 CDD:320556 1/21 (5%)
TM helix 4 655..671 CDD:320556 4/15 (27%)
TM helix 5 690..713 CDD:320556 5/23 (22%)
TM helix 6 744..766 CDD:320556 7/25 (28%)
TM helix 7 771..796 CDD:320556 8/27 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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