DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mthl7 and Adgrl4

DIOPT Version :9

Sequence 1:NP_648181.2 Gene:mthl7 / 38910 FlyBaseID:FBgn0035847 Length:491 Species:Drosophila melanogaster
Sequence 2:NP_573485.2 Gene:Adgrl4 / 170757 MGIID:2655562 Length:739 Species:Mus musculus


Alignment Length:482 Identity:91/482 - (18%)
Similarity:168/482 - (34%) Gaps:153/482 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 DGSITPIEKHLRA-------------CVCSVRPCIRICCPAKNFLANGKCDDG----------LK 108
            ||....|....:|             |..|:.|   :...:.|||.:.:.|:.          :.
Mouse   324 DGGYVKISPRRKAAHGTTGNVVVAFLCYKSIGP---LLSSSDNFLLDTQNDNSEGKEKVISSVIS 385

  Fly   109 EELARFKPYIY------FTYMDLQARVPLTDMAIIRDEFFDCDEMIYISDFNYFLEEVSIQIFNK 167
            ..::...|.:|      ||.    :.|.|:|....:..|           :||     |:...|.
Mouse   386 ASISSNPPTLYELEKITFTL----SHVKLSDKHRTQCAF-----------WNY-----SVDAMNN 430

  Fly   168 CGLIVWFQDGKFWVTVDLFMEKQDYCLYRHNFDSDFPKSMWIIRH---RCTSHI--------SPG 221
            ..   |..:|               |...|:.|:          |   || ||:        |..
Mouse   431 GS---WSTEG---------------CELTHSNDT----------HTSCRC-SHLTHFAILMSSTS 466

  Fly   222 SLEI-------------LIITMICFVLTIAVYLYIKKLRNVTGKCI---VCCIVSRFIQCLIMIL 270
            |:.|             :||::||..:.|..:.:..:::: |...|   :||  |.|:..|:.::
Mouse   467 SIGIKDYNILTRITQLGIIISLICLAICIFTFWFFSEIQS-TRTTIHKNLCC--SLFLAELVFLI 528

  Fly   271 D-HLNLLNGICSPAGYSSHFFRMASNLWLSVISYHTWKVLTSLNRVDPNYRFLRYNAFVWS--TA 332
            . ::|....:||......|:|.:|:..|:.:...|.:.::..   |..|..||..|.:::.  :.
Mouse   529 GININTNKLVCSIIAGLLHYFFLAAFAWMCIEGIHLYLIVVG---VIYNKGFLHKNFYIFGYLSP 590

  Fly   333 AIMTG-------SIYIVNQIWENDPSKWNWLPLVGFIRCSVKDWHPSVWIYISGPSLALSTFNVA 390
            |::.|       ..|...::                  |.:...:..:|.:| ||:..:...|:.
Mouse   591 AVVVGFSASLGYRYYGTTKV------------------CWLSTENNFIWSFI-GPACLIILVNLL 636

  Fly   391 MFALTAIYIRKVKGGINKFTNEEEGRINCINFDSQTYLQFLRLSIVMGLTWIFNVIPYSARLHIF 455
            .|.:....:.:...|:       :..::|...........|.|..::|.||||.|: :.....:.
Mouse   637 AFGVIIYKVFRHTAGL-------KPEVSCYENIRSCARGALALLFLLGTTWIFGVL-HVVHASVV 693

  Fly   456 WEWVGIISEYFHSAFGIVLFVLLVLKR 482
            ..::..:|..|...| |.|| |.||.|
Mouse   694 TAYLFTVSNAFQGMF-IFLF-LCVLSR 718

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mthl7NP_648181.2 Mth_Ecto 27..214 CDD:299804 29/178 (16%)
Adgrl4NP_573485.2 EGF_CA 58..91 CDD:214542
EGF_CA 108..141 CDD:214542
GAIN 190..370 CDD:293098 10/48 (21%)
GPS 417..461 CDD:280071 15/88 (17%)
7tm_4 473..709 CDD:304433 48/269 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4193
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.