DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nmt and nmt2

DIOPT Version :9

Sequence 1:NP_523969.1 Gene:Nmt / 38909 FlyBaseID:FBgn0020392 Length:472 Species:Drosophila melanogaster
Sequence 2:NP_001186683.1 Gene:nmt2 / 556483 ZFINID:ZDB-GENE-030131-717 Length:493 Species:Danio rerio


Alignment Length:484 Identity:272/484 - (56%)
Similarity:341/484 - (70%) Gaps:39/484 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 NENAEDLSGQEL-------KQKAKEVADASEAMLEKVVAGLNIQDTASTNAAGNEDAEQPDGAKN 60
            ||:.:...|.:|       |||.|:         ||..:|    .|.|.:|:.:::.:.|     
Zfish    33 NEHMQGSPGGDLGAKKKKKKQKRKK---------EKPSSG----GTKSDSASDSQEIKNP----- 79

  Fly    61 EASVSANASKQALLQAVSDAMASTRQMAK--------KFAFWSTQPVTKLDEQVTTNECIEPNKE 117
                :....|...:|...:.:::.:..||        |:.||.||||.||:|.|||:..|||:||
Zfish    80 ----AIPMQKLQDIQRAMELLSTCQGPAKNIDEATKHKYQFWDTQPVPKLNEVVTTHGPIEPDKE 140

  Fly   118 ISEIRALPYTLPGGFKWVTLDLNDANDLKELYTLLNENYVEDDDAMFRFDYQPEFLKWSLQPPGW 182
              .||..||:||.||.|.||||::|..|||||||||||||||||.||||||.|.||||:|:||||
Zfish   141 --NIRQEPYSLPQGFMWDTLDLSNAEVLKELYTLLNENYVEDDDNMFRFDYSPNFLKWALRPPGW 203

  Fly   183 KRDWHVGVRVEKSGKLVGFISAIPSKLKSYDKVLKVVDINFLCVHKKLRSKRVAPVLIREITRRV 247
            ...||.||||..:.||||||||||:.:..||.:.::|:|||||||||||||||||||||||||||
Zfish   204 LPHWHCGVRVSSNKKLVGFISAIPADIHIYDTLKRMVEINFLCVHKKLRSKRVAPVLIREITRRV 268

  Fly   248 NLTGIFQAAYTAGVVLPTPVATCRYWHRSLNPKKLVDVRFSHLARNMTMQRTMKLYKLPDQPKTK 312
            ||.|||||.||||||||.||:|||||||||||:|||:|:||||:||||:|||||||:|||..:|.
Zfish   269 NLEGIFQAVYTAGVVLPKPVSTCRYWHRSLNPRKLVEVKFSHLSRNMTLQRTMKLYRLPDSTRTP 333

  Fly   313 GYRRITAKDMDKAHKLLEDYLKRFQLSPVFSKEEFRHWFTPKEGIIDCFVVADEKGNITDLTSYY 377
            |.|.:..:|:.:...||:.:|.:|.|.||..:||.:|||.|:|.|||.|||....|.:||..|:|
Zfish   334 GLRTMGDRDVKQVTALLQKHLSQFHLRPVMGEEEVKHWFLPQENIIDTFVVEGSGGMLTDFISFY 398

  Fly   378 CLPSSVMHHPVHKTVRAAYSFYNVSTKTPWLDLMNDALISARNVQMDVYNALDLMENKKYFAPLK 442
            .|||:|||||:||:::||||||||.|:||.:||||||||.|:....||:||||||:||.:...||
Zfish   399 TLPSTVMHHPLHKSLKAAYSFYNVHTETPLIDLMNDALILAKLKGFDVFNALDLMDNKNFLEKLK 463

  Fly   443 FGAGDGNLQYYLYNWRCPSMQPEEIALIL 471
            ||.||||||||||||:||.|.||::.|:|
Zfish   464 FGIGDGNLQYYLYNWKCPPMDPEKVGLVL 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NmtNP_523969.1 NMT 112..268 CDD:279562 114/155 (74%)
NMT_C 284..459 CDD:280893 104/174 (60%)
nmt2NP_001186683.1 NMT1 114..492 CDD:227423 251/379 (66%)
NMT 134..289 CDD:279562 114/156 (73%)
NMT_C 305..480 CDD:280893 104/174 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581259
Domainoid 1 1.000 245 1.000 Domainoid score I2146
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 539 1.000 Inparanoid score I1148
OMA 1 1.010 - - QHG53825
OrthoDB 1 1.010 - - D1025421at2759
OrthoFinder 1 1.000 - - FOG0002110
OrthoInspector 1 1.000 - - otm26452
orthoMCL 1 0.900 - - OOG6_101234
Panther 1 1.100 - - O PTHR11377
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R818
SonicParanoid 1 1.000 - - X1227
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.900

Return to query results.
Submit another query.