DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG13675 and Tro

DIOPT Version :10

Sequence 1:NP_001261563.1 Gene:CG13675 / 38907 FlyBaseID:FBgn0035845 Length:355 Species:Drosophila melanogaster
Sequence 2:NP_001002272.1 Gene:Tro / 56191 MGIID:1928994 Length:2087 Species:Mus musculus


Alignment Length:251 Identity:54/251 - (21%)
Similarity:95/251 - (37%) Gaps:56/251 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 SNVNCEGSEQLYQNNDELYRIPERQQQLNDVXYEADDEYKIGTAN-----GTRQRGGRQRQFQKQ 180
            ||...|.|.:..:.::.......||.:.:.. .|..:. :||.:|     ..||.|...||.:..
Mouse   272 SNRQIEASSRQTEASNRQTEASSRQTEASSRQTETSNR-QIGASNRQIMASNRQIGASNRQIEAS 335

  Fly   181 QQQ------KQQQQQHQALNSNTAIGGIN----SSNRIVDSSNYSKMTKNSFRGSMRFTTPSTNP 235
            .:|      :.:....|...||..||..|    :|||.:.:||......|...|:....|.::|.
Mouse   336 NRQIGASNRQTEVSSRQIEASNRQIGASNRQTEASNRQIGASNRQTEASNRQIGASNRQTDASNR 400

  Fly   236 QSSYSSSQQQQQQQQQQQKQHQKQHNSSRNSERKSKPSSVNHRDRDSNQTRSRNRTHNTPQSGKK 300
            |:..|:.|.:...:|.:.        |||.:|..|:.:..:.|..:::....|.:   .|:..|.
Mouse   401 QTDASNRQTEASSRQTEA--------SSRQTEASSRQTEASSRQIEASAAAVRPK---KPRGKKG 454

  Fly   301 NNSNNNS----------------------------SRGKQRYNTNK-FENDAELKD 327
            ||..:||                            ||.::..|.|: .|:.|::.:
Mouse   455 NNKGSNSASEPSEAPPAIQTVTNHALSVTVRIRRGSRARKAANKNRATESQAQIAE 510

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG13675NP_001261563.1 CBM_14 72..125 CDD:426342 2/3 (67%)
TroNP_001002272.1 growth_prot_Scy <97..>524 CDD:469371 54/251 (22%)
MscS_porin 268..>445 CDD:432790 41/181 (23%)
MAGE 596..756 CDD:426270
FhaB 859..2081 CDD:442443
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.