DRSC/TRiP Functional Genomics Resources

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Protein Alignment mus301 and AT5G61140

DIOPT Version :10

Sequence 1:NP_648178.1 Gene:mus301 / 38905 FlyBaseID:FBgn0002899 Length:1051 Species:Drosophila melanogaster
Sequence 2:NP_001190584.1 Gene:AT5G61140 / 836235 AraportID:AT5G61140 Length:2157 Species:Arabidopsis thaliana


Alignment Length:1099 Identity:240/1099 - (21%)
Similarity:423/1099 - (38%) Gaps:277/1099 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 TNKMTQSGSDDGLGLFADTSFPSAQS------------------VPPNSASKPDEASAPTDKHQI 116
            ::|..:..:.|.|.|..|.:|.:.|.                  :..:.|:...::..||...|:
plant   326 SDKPGEEIAGDLLDLVGDGAFETVQDLIMHRKEIVDAIHHGQMILKSDKAASNTQSRMPTYGTQV 390

  Fly   117 DLADE--ENADKLFKKINLNDLSIAEMEDIFHGADDFSDPMVQNTQLFLDAMTFKKPKTPEKLLA 179
            .:..|  :..:||.:|....:...|::     |.:  |:....|....|:|.  :|....|.|:.
plant   391 TVQTESAKQIEKLRRKEEKKNKRNADL-----GLE--SEISEANFSSLLEAS--EKKTAFEDLIG 446

  Fly   180 PLKDDSMSFISKSVIEGLVQGTQYVTCEELK--NQSLLDPVNWETQAFADFEK--NNQDIDKFPS 240
            ..:.:|::.       .|.|||   ..:.||  .:..:.|.  .|......||  ..:::|.| :
plant   447 SGEANSLAL-------ALPQGT---VRKHLKGYEEVFIPPT--PTAQMKPGEKLIEIKELDDF-A 498

  Fly   241 KGEFYGLPDKVKKMILEHKGINSLYEWQDECLNLPAIRQRKNLIYALPTSGGKTLVAEILMLRE- 304
            :..|:|           :|.:|.:   |..... ......:|::...||..|||.:|.|.:|.| 
plant   499 QAAFHG-----------YKSLNRI---QSRIFQ-TVYHTNENILVCAPTGAGKTNIAMISVLHEI 548

  Fly   305 --------LLCRERNVLFILPYVSIVQEKVSAMSPFAIDLDFIVEEYTAGKGKCPPQPRRKRRSL 361
                    |...|..::::.|..::..|..||.|.....|:.:|:|.|.....  .:...:...:
plant   549 KQHFRDGYLHKNEFKIVYVAPMKALAAEVTSAFSRRLAPLNMVVKELTGDMQL--TKTELEETQM 611

  Fly   362 FIASIEKGAVLMDSLIDVQRPHEIGLVVVDELHLIGEKGRGATLEAF----LTKVMFLNANIQIV 422
            .:.:.||..|:.....|:.....:.|:::||:||:.: .|||.:||.    |.:|......|:||
plant   612 IVTTPEKWDVITRKSSDMSMSMLVKLLIIDEVHLLND-DRGAVIEALVARTLRQVESTQTMIRIV 675

  Fly   423 GMSATIGNLSEISSFL--NADV----YTRGFRPVEL-KEYIKCGPDLLEINSA--GQTLEEIFVP 478
            |:|||:.:..:::.||  |.|.    :...:|||.| ::||    .:.|.|.|  .:.|.||.  
plant   676 GLSATLPSYLQVAQFLRVNTDTGLFYFDSSYRPVPLAQQYI----GITEHNFAARNELLNEIC-- 734

  Fly   479 SRSVEYNYSEAVKRADPDHLAGLISECAPEHCCLVFCPSRKNCENVALLLSRIVPKHKFFEHRRS 543
                   |.:.|......|.|            ::|..|||:....|..|..:..:::..:...:
plant   735 -------YKKVVDSIKQGHQA------------MIFVHSRKDTSKTAEKLVDLARQYETLDLFTN 780

  Fly   544 E--------KLDLMDALDKMCGILSPVLAKTLPYGIAYHHSGLTTDERKYIETAYRFGVVTVICC 600
            |        |.|:|.:.:|       .|.|....|...||:|:...:|...|..:..|::.|:.|
plant   781 ETHPQFQLMKKDVMKSRNK-------DLVKFFEAGFGIHHAGMLRSDRTLTERLFSDGLLKVLVC 838

  Fly   601 TSTLAAGVNLPAKRVIIRAPYV------GQEFLTLCKYKQMVGRAGRAGLGEAGESILIAQSKD- 658
            |:|||.||||||..|:|:...:      |.:.|.:....|:.|||||....::||.|:|. |.| 
plant   839 TATLAWGVNLPAHTVVIKGTQLYDAKAGGWKDLGMLDVMQIFGRAGRPQFDKSGEGIIIT-SHDK 902

  Fly   659 -----NLLVGQMLFSPMD-KALSSLDQNEAVGLQSLILSVVGLNLAE-CRRDLNRLVNSTLLSVQ 716
                 .||..|:   |:: :.:|||..|    |.:.::.....|:.| |     ..:..|.||::
plant   903 LAYYLRLLTSQL---PIESQFISSLKDN----LNAEVVLGTVTNVKEAC-----AWLGYTYLSIR 955

  Fly   717 AKSLEVAVNEIVLRILREMFKNKVLQLAEPQAKSKINSSDIITSQDVSQANRPAGDRRLLIGQST 781
            .|     :|.:...|..|..      :|:|....|..:.....::.:.:|.....|.:     |.
plant   956 MK-----LNPLAYGIGWEEI------IADPSLSLKQRALVADAARSLDKAKMMRFDEK-----SG 1004

  Fly   782 PFKLTNIGRAAFKAGIDYKRANAIHKELKQAQQQLILTNYLHLLYLVVCFNSNERGDELFPADAS 846
            .|..|.:||.|....|.|......::.||:...:..:.|        :..:|:|           
plant  1005 NFYCTELGRVASHFYIQYSSVETYNEMLKRHMNESEIIN--------MVAHSSE----------- 1050

  Fly   847 ILFGVYTSLPLDSQAMFKQLGFTEAHAARLFKTQSVQGPLSLQ---LNRLYKVLILADILNLLPI 908
                            |:.:...|.....|........||.::   .|:..|:.||..:.     
plant  1051 ----------------FENIVVREEEQHELETLARSCCPLEVKGGPSNKHGKISILIQLY----- 1094

  Fly   909 PSVASKYNVERGTLQ--HLISQSTAAASAIVRLCEELEEF-----WCYKPLFERILHKMDRCGTF 966
                    :.||::.  .|:|.::..::::.|:...|.|.     ||     |..|..::.|...
plant  1095 --------ISRGSIDAFSLVSDASYISASLARIMRALFEICLRKGWC-----EMTLFMLEYCKAV 1146

  Fly   967 ELE------PL----MELPAVKINRARQ-------LYAAGFQTIGDIARVRP-SHLV-QSLEHMP 1012
            :.:      ||    .:||:..:.:..:       ||....:.||.:.|..| ..|| |.|.:.|
plant  1147 DRQLWPHQHPLRQFERDLPSDILRKLEERRDDLDHLYEMEEKEIGALIRYNPGGRLVKQHLGYFP 1211

  Fly  1013 -LRVATEIVSAAKIILMKKLD-------------H--------LEEETENLKDCLKTSD 1049
             :::|..:....:.:|  |:|             |        |.|:|||  |.:..||
plant  1212 SIQLAATVSPITRTVL--KVDLLITPNFIWKDRFHGTALRWWILIEDTEN--DYIYHSD 1266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mus301NP_648178.1 DEXHc_POLQ-like 247..449 CDD:350784 51/220 (23%)
BRR2 255..828 CDD:440817 150/616 (24%)
AT5G61140NP_001190584.1 BRR2 490..1046 CDD:440817 154/643 (24%)
DEXHc_ASCC3_1 507..703 CDD:350778 50/202 (25%)
Sec63 1008..1315 CDD:460740 60/316 (19%)
DEXHc_ASCC3_2 1355..1543 CDD:350780
BRR2 1356..1877 CDD:440817
Sec63 1839..2151 CDD:460740
Blue background indicates that the domain is not in the aligned region.

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