DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mus301 and AT4G32700

DIOPT Version :9

Sequence 1:NP_648178.1 Gene:mus301 / 38905 FlyBaseID:FBgn0002899 Length:1051 Species:Drosophila melanogaster
Sequence 2:NP_001078482.1 Gene:AT4G32700 / 829406 AraportID:AT4G32700 Length:2154 Species:Arabidopsis thaliana


Alignment Length:1251 Identity:334/1251 - (26%)
Similarity:530/1251 - (42%) Gaps:343/1251 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KHNLCKKRSLDLSEESTSESHAKRQC-TEN------LFWPEGEDDDSFFSNAHLEDLLDGRKEEL 61
            |.|..|:||...|.....:...||:| :||      |..|.|...:|...|.:..|         
plant   168 KENELKRRSSSSSLAQDIQISHKRRCESENIPSLDDLTNPLGSKPESLARNGNNRD--------- 223

  Fly    62 FGTQATTSTNKMTQSGS-DDGLGLFADTSFPSAQS-----VPPNSASK----------------- 103
              ...:..|.||..:.| :..:||...:..|.:.:     ..|.||.|                 
plant   224 --KPVSDPTKKMPSNESVEIPMGLRKCSKAPESSAHLTEFHTPGSAIKSCPVGTPKSGCGSSMFS 286

  Fly   104 PDEA-----------------------SAPTDKHQIDLADEENAD----KLFKKINLNDLSIAEM 141
            |.||                       :...|:|...|:..:..|    ||.:.::|:::.:.:.
plant   287 PGEAFWNEAIQVADGLTIPIENFGSVEAKVRDQHVTILSCSKKTDKCTEKLERSLDLDEIRVKDK 351

  Fly   142 EDI-------FHGADDFSDPM----VQNTQ-LFLDAMTFKKPKTPEKLLAPLKDDSMSF------ 188
            :.|       .||. ||:..:    |:|.: ||.|          :.:...:::...||      
plant   352 DAIGFSKVVEKHGR-DFNKEVYQLPVKNLELLFQD----------KNINGGIQERCASFDQNNIT 405

  Fly   189 -----ISKSVI------------------EGLV-------QGTQYVTCEE---LKNQSLLD---- 216
                 ||:|..                  :||:       :|.:.:.|||   :::.|::.    
plant   406 LGSSRISESAFVGNKGCENLDIANNAQADKGLIGKMYPEPEGKKVLLCEENRGVRSVSMISNMRK 470

  Fly   217 PVNWETQAFADFEKNNQDIDKFPSKG--EFYG------LPDKVKKMILEHKGINSLYEWQDECLN 273
            ||.          .:..:....||..  .:.|      ||.:|.. :...|||:.||.||.|||.
plant   471 PVG----------SSESEESHTPSSSHRNYDGLSLSTWLPSEVCS-VYNKKGISKLYPWQVECLQ 524

  Fly   274 LPAIRQRKNLIYALPTSGGKTLVAEILMLRELLCRERNVLFILPYVSIVQEKVSAMSPFAIDLDF 338
            :..:.|::||:|...||.||:.|||:||||.::...:..|.:||||||..||...:......|..
plant   525 VDGVLQKRNLVYCASTSAGKSFVAEVLMLRRVIRTGKMALLVLPYVSICAEKAEHLEVLLEPLGK 589

  Fly   339 IVEEY--TAGKGKCPPQPRRKRRSLFIASIEKGAVLMDSLIDVQRPHEIGLVVVDELHLIGEKGR 401
            .|..|  ..|.|..|     |..|:.:.:|||...|::.|::..|..|:|::|:||||::|::.|
plant   590 HVRSYYGNQGGGTLP-----KDTSVAVCTIEKANSLINRLLEEGRLSELGIIVIDELHMVGDQHR 649

  Fly   402 GATLEAFLTKVMFLNA-----------------------NIQIVGMSATIGNLSEISSFLNADVY 443
            |..||..|||:.:...                       .:||||||||:.|:..::.:|.|.:|
plant   650 GYLLELMLTKLRYAAGEGSSESSSGESSGTSSGKADPAHGLQIVGMSATMPNVGAVADWLQAALY 714

  Fly   444 TRGFRPVELKEYIKCGPDLLEINSAGQTLEEIFVPSRSVEYNYSEAVKRA----------DPDHL 498
            ...||||.|:||||.|                     |..||....|.|.          ||||:
plant   715 QTEFRPVPLEEYIKVG---------------------STIYNKKMEVVRTIPKAADMGGKDPDHI 758

  Fly   499 AGLISECAPE-HCCLVFCPSRKNCENVALLLSRI---VPKHKFFEHRRSEKLDLMDALDKM---- 555
            ..|.:|...| :..|:||.|||.||:.|..:|::   ||.:  .:...||.:|:..|:|.:    
plant   759 VELCNEVVQEGNSVLIFCSSRKGCESTARHISKLIKNVPVN--VDGENSEFMDIRSAIDALRRSP 821

  Fly   556 CGILSPVLAKTLPYGIAYHHSGLTTDERKYIETAYRFGVVTVICCTSTLAAGVNLPAKRVIIRAP 620
            .|: .|||.:|||.|:||||:|||.:||:.:||.||.|:|.|:..||||||||||||:|||.|.|
plant   822 SGV-DPVLEETLPSGVAYHHAGLTVEEREIVETCYRKGLVRVLTATSTLAAGVNLPARRVIFRQP 885

  Fly   621 YVGQEFLTLCKYKQMVGRAGRAGLGEAGESILIAQSKDNLLVGQML---FSPMDKALSSLDQNEA 682
            .:|::|:...:||||.|||||.|:...|:|:||.:..:...:..:|   ..|:...||. |:|  
plant   886 MIGRDFIDGTRYKQMSGRAGRTGIDTKGDSVLICKPGELKRIMALLNETCPPLQSCLSE-DKN-- 947

  Fly   683 VGLQSLILSVVGLNLAECRRDLNRLVNSTLLSVQAKSLEVAVNEIVLRILREMFKNKVLQLAEPQ 747
             |:...||.||...:.:..:|::|.|..|||: ..|..:..|.. ....||.:...|.|:..|  
plant   948 -GMTHAILEVVAGGIVQTAKDIHRYVRCTLLN-STKPFQDVVKS-AQDSLRWLCHRKFLEWNE-- 1007

  Fly   748 AKSKINSSDIITSQDVSQANRPAGDRRLLIGQSTPFKLTNIGRAAFKAGIDYKRANAIHKELKQA 812
             ::|:                              :..|.:||.:|.:.:..:.:..:..:|.:|
plant  1008 -ETKL------------------------------YTTTPLGRGSFGSSLCPEESLIVLDDLLRA 1041

  Fly   813 QQQLILTNYLHLLYLVVCFNSN---------ERGDELFPADASILFGVYTSLPLDSQAMFKQLGF 868
            ::.|::.:.|||:|||...|..         ||..||.|.:               |::..::|.
plant  1042 REGLVMASDLHLVYLVTPINVGVEPNWELYYERFMELSPLE---------------QSVGNRVGV 1091

  Fly   869 TE------AHAA---RLFKTQSVQ-----------GPLSLQL----------NRLYKVLILADIL 903
            .|      ||.|   .|.:.|.|:           |..|:::          .|.:..|||:.::
plant  1092 VEPFLMRMAHGATVRTLNRPQDVKKNLRGEYDSRHGSTSMKMLSDEQMLRVCKRFFVALILSKLV 1156

  Fly   904 NLLPIPSVASKYNVERGTLQHLISQSTAAASAIVRLCEELEEFWCYKPLFERILHKMDRCGTF-- 966
            ....:..|...:.|.||.:|.|...:...:|.:...||.|.  |   ...|.::.|.....:|  
plant  1157 QEASVTEVCEAFKVARGMVQALQENAGRFSSMVSVFCERLG--W---HDLEGLVAKFQNRVSFGV 1216

  Fly   967 --ELEPLMELPAVKINRARQLYAAGFQTIGDIARVRPSHLVQSL-------------EHMPLRVA 1016
              |:..|..:|.:|.:|||.||.||.:|...||......:|::|             ..:.|.:|
plant  1217 RAEIVELTSIPYIKGSRARALYKAGLRTSQAIAEASIPEIVKALFESSAWAAEGTGQRRIHLGLA 1281

  Fly  1017 TEIVSAAKIILMKKLD 1032
            .:|.:.|:.|:::|.:
plant  1282 KKIKNGARKIVLEKAE 1297

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mus301NP_648178.1 BRR2 247..998 CDD:224125 260/839 (31%)
DEXHc_POLQ-like 247..449 CDD:350784 79/226 (35%)
AT4G32700NP_001078482.1 BRR2 499..1260 CDD:224125 262/849 (31%)
DEXHc_POLQ-like 499..720 CDD:350784 79/226 (35%)
DnaQ_like_exo <1679..1719 CDD:415823
DNA_pol_A_theta 1724..2148 CDD:176475
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 138 1.000 Domainoid score I1575
eggNOG 1 0.900 - - E1_COG0749
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D179246at2759
OrthoFinder 1 1.000 - - FOG0001214
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101025
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
87.680

Return to query results.
Submit another query.