DRSC/TRiP Functional Genomics Resources

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Protein Alignment mus301 and POLG

DIOPT Version :9

Sequence 1:NP_648178.1 Gene:mus301 / 38905 FlyBaseID:FBgn0002899 Length:1051 Species:Drosophila melanogaster
Sequence 2:NP_001119603.1 Gene:POLG / 5428 HGNCID:9179 Length:1239 Species:Homo sapiens


Alignment Length:714 Identity:145/714 - (20%)
Similarity:227/714 - (31%) Gaps:235/714 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   438 LNADVYTRGFRPVELKEYIKCGPDLLEINSAGQTLEEIFVPSRSVEYNYSEAVKRADPDHLAGLI 502
            |..|...:.||.:..|:.:   |.|    .|...|.:..:|.:...:.::|...|..|:..|  :
Human   130 LYGDNLDQHFRLLAQKQSL---PYL----EAANLLLQAQLPPKPPAWAWAEGWTRYGPEGEA--V 185

  Fly   503 SECAPEHCCLVF----CPSRKNCENVALLLSRIVP-------KHKFFEHRRSEKLDLMDA----L 552
            ....||...|||    |.:...|..:|:.:|   |       ..:..|.|.|....|..|    |
Human   186 PVAIPEERALVFDVEVCLAEGTCPTLAVAIS---PSAWYSWCSQRLVEERYSWTSQLSPADLIPL 247

  Fly   553 DKMCGILSPVLAKTLPYGIAYHHSGLTTDERKYIETAYRFGVVTVICCTSTLAAGVNLPAKRVII 617
            :...|..||.                   :|.:.|               .|..|.|:...|..|
Human   248 EVPTGASSPT-------------------QRDWQE---------------QLVVGHNVSFDRAHI 278

  Fly   618 RAPYVGQ----EFLTLCKYKQMVGRAGRAGLGEAGESILIAQSKDNLLVGQMLFSPMDK------ 672
            |..|:.|    .||........:     :||.....|:.||..:     |:....|..|      
Human   279 REQYLIQGSRMRFLDTMSMHMAI-----SGLSSFQRSLWIAAKQ-----GKHKVQPPTKQGQKSQ 333

  Fly   673 -------ALSSLDQNEAVGLQSLILSVVGLN-LAECRRDLNRLVNSTLLSVQAKSLEVAVNEI-- 727
                   |:||.|.          |.:..:| |||..|          |.|....||....|:  
Human   334 RKARRGPAISSWDW----------LDISSVNSLAEVHR----------LYVGGPPLEKEPRELFV 378

  Fly   728 --VLRILREMFKNKVLQLAEPQAKSKINSSDIITSQDVSQANRPAGDRRLLIGQSTPFKLTNIGR 790
              .::.:||.|::.:...|:          |:..:.:|.|...|      |..:..|..:|..| 
Human   379 KGTMKDIRENFQDLMQYCAQ----------DVWATHEVFQQQLP------LFLERCPHPVTLAG- 426

  Fly   791 AAFKAGIDYKRAN---------------AIHKELKQAQQQLILTNYLHLLYLVVCFNSNERGDEL 840
             ..:.|:.|...|               .:.:|:|::...| ..:...||       |.||..| 
Human   427 -MLEMGVSYLPVNQNWERYLAEAQGTYEELQREMKKSLMDL-ANDACQLL-------SGERYKE- 481

  Fly   841 FPADASILFGVYTSLPLDSQAMFKQLGFTEAHAARL----------FKTQSVQGPLSLQLNRLYK 895
                ...|:.:...|....|...|::....|.|::|          ...|...||.|.:......
Human   482 ----DPWLWDLEWDLQEFKQKKAKKVKKEPATASKLPIEGAGAPGDPMDQEDLGPCSEEEEFQQD 542

  Fly   896 VLILADILNLLPIPSVASKYNVERGTL-------QHLISQSTAAASAIVRLCEELEE-FWCYKP- 951
            |:..|.:..|             :||.       |||    ........:||..|:: .|...| 
Human   543 VMARACLQKL-------------KGTTELLPKRPQHL----PGHPGWYRKLCPRLDDPAWTPGPS 590

  Fly   952 ---LFERI-------------LHKMDRCGTFELEPLMELPAVKINRARQLYAAGFQTIGDIARVR 1000
               |..|:             ||..:|.|...|.|.......|:.....|.:||.        |.
Human   591 LLSLQMRVTPKLMALTWDGFPLHYSERHGWGYLVPGRRDNLAKLPTGTTLESAGV--------VC 647

  Fly  1001 PSHLVQSL--EH---------MPLR--VATEIV---SAAKIILMKKLDHLEEETENLKDCLKTS 1048
            |...::||  :|         ||..  :|.|.:   ::|....:::||:||.|.|...:.|:.:
Human   648 PYRAIESLYRKHCLEQGKQQLMPQEAGLAEEFLLTDNSAIWQTVEELDYLEVEAEAKMENLRAA 711

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mus301NP_648178.1 BRR2 247..998 CDD:224125 128/646 (20%)
DEXHc_POLQ-like 247..449 CDD:350784 3/10 (30%)
POLGNP_001119603.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..68
DnaQ_like_exo <265..>297 CDD:299142 10/31 (32%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 318..340 3/21 (14%)
DNA_pol_A 431..>473 CDD:295402 6/42 (14%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 506..531 4/24 (17%)
DNA_pol_gammaA 785..1203 CDD:176478
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0749
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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