DRSC/TRiP Functional Genomics Resources

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Protein Alignment mus301 and CG9630

DIOPT Version :9

Sequence 1:NP_648178.1 Gene:mus301 / 38905 FlyBaseID:FBgn0002899 Length:1051 Species:Drosophila melanogaster
Sequence 2:NP_649777.1 Gene:CG9630 / 40974 FlyBaseID:FBgn0037561 Length:613 Species:Drosophila melanogaster


Alignment Length:668 Identity:124/668 - (18%)
Similarity:220/668 - (32%) Gaps:200/668 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   230 KNNQDIDKFPSKGEFYGLPDKVKKMILEHKGINSLYEWQDECLNLPAIRQRKNLIYALPTSGGKT 294
            |....:||.|       |.|.|.: :::..|...:...|...  :|.:..||::.....|..|||
  Fly     4 KKWSSLDKPP-------LSDAVLQ-VVQSFGFQQMTPVQTAA--IPLLLARKDVSAEAVTGSGKT 58

  Fly   295 LVAEILMLRELLCR----------ERNVLFILPYVSIVQEKVSAMSPFA--IDLDFIVEEYTAGK 347
            |...:.|| |:|.|          |...|.|.|...:.::....::.|.  .||:.:.::...|.
  Fly    59 LAFLVPML-EILQRRHKETPWGPKEIGALVISPTRELARQISEVLAQFLEHEDLEHLNQQLIVGG 122

  Fly   348 GKCPPQPRRKRRSLFIASIEKGAVLMDSLIDVQRPHEIGLVVVDELHLIGEKGRGATLEAFLTKV 412
            ..........||       |...:|      |..|..:.       .|...||....|.|.:..:
  Fly   123 NSIEEDIATLRR-------ETPCIL------VCTPGRLE-------DLFQRKGDDLNLAAQVKSL 167

  Fly   413 MFLNAN----IQIVGMSATIGNLSEISSFLNADVYTRGF---RPVELKEYIKCG---PDLLEINS 467
            .||..:    :..:|...::.|   |..:|.....|..|   :..|:.:.|:.|   |.|:.:..
  Fly   168 EFLVLDEADRLLDLGFKTSVNN---ILGYLPRQRRTGLFSATQTTEVTDLIRAGLRNPVLVSVKE 229

  Fly   468 AGQTLEEIFVPSRSVEYNYSEAVKRADPDHLAGLISECAPEHCCLVFCPSRKNCENVALLLSRIV 532
            ..    .:..|:|.  .|:...|:               ||   |.|....:...:.|.::.:::
  Fly   230 KA----SVNTPARL--QNFYRIVE---------------PE---LKFVALLEFLSSPATVIGKVM 270

  Fly   533 PKHKFFEHRRSEKLDLMDALDKMCGILSPVLAKTLPYGIAYHHSGLTTDERKYIETAYRFGVVTV 597
               .||        .....::.....|.|:|.|....||    .|...::|..:...:|.....|
  Fly   271 ---VFF--------PTCACVEYWAEALPPLLPKRTVLGI----HGKMKNKRANVVEKFRNTPQAV 320

  Fly   598 ICCTSTLAAGVNLPAKRVIIR--APYVGQEFLTLCKYKQMVGRAGRAGLGEAGESILIAQSKD-- 658
            :.||..||.|:::|....:::  .|.....|:      ..|||..|.| .|....:.:..|:|  
  Fly   321 LLCTDVLARGLDVPEIEWVVQWDPPSTASSFV------HRVGRTARQG-NEGNALVFLLPSEDAY 378

  Fly   659 -------------NLLVGQMLFSPMDK-----ALSSLDQNEAV-------GLQSLILSVVGLNLA 698
                         .||..:...:..:|     .|..|.:.:|.       |:::.:..|......
  Fly   379 VHFLKINQKVELTKLLTEEAEDADREKKKLPAVLDQLHRLQAADKGVYDKGMRAFVSHVRAYTKH 443

  Fly   699 ECRR-------DLNRLVNS----------TLLSVQ-----AKSLEVAVNEIVLR-ILREMFKNKV 740
            ||..       ||.::..:          .|.:.|     |.:.||.::::..: ..:|..:.|.
  Fly   444 ECSAILRLKDLDLGKMATAYGLLQLPRMPELKNYQGGGYVAPAFEVDLSKLTYKNAQKEQVRQKK 508

  Fly   741 LQLAE--------PQAKSKINSSDIITSQDVSQANRPAGDRRLLIGQSTPFKLTNIGRAAFKAGI 797
            ::..|        .|.|.::.|.|                                  ...||.:
  Fly   509 METYEQTGSWPGQKQHKKRVESWD----------------------------------QTKKAKL 539

  Fly   798 DYKRANAIHKELKQAQQQ 815
            |.|.    .|||::|::|
  Fly   540 DAKS----KKELRKAKKQ 553

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mus301NP_648178.1 BRR2 247..998 CDD:224125 120/651 (18%)
DEXHc_POLQ-like 247..449 CDD:350784 45/220 (20%)
CG9630NP_649777.1 DEADc 6..226 CDD:238167 53/253 (21%)
DEXDc 22..232 CDD:214692 47/239 (20%)
HELICc 239..370 CDD:238034 33/172 (19%)
DUF4217 411..470 CDD:290667 9/58 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24031
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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