DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mus301 and CG9143

DIOPT Version :9

Sequence 1:NP_648178.1 Gene:mus301 / 38905 FlyBaseID:FBgn0002899 Length:1051 Species:Drosophila melanogaster
Sequence 2:NP_611467.1 Gene:CG9143 / 37296 FlyBaseID:FBgn0034496 Length:813 Species:Drosophila melanogaster


Alignment Length:882 Identity:168/882 - (19%)
Similarity:291/882 - (32%) Gaps:304/882 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    78 SDDG------LGLFA----DTSFPSAQSVPPNSASKPDEASAPTDKHQIDLADEENADKLFKKIN 132
            ||||      :||..    |.|...:......|.:...|......|.::...|||.:.:      
  Fly    41 SDDGGGFEGLIGLEVLKDYDASLVKSSQKRTTSRNPDRERKLKKKKRKVSKGDEEESSE------ 99

  Fly   133 LNDLSIAEMEDIFHGADDFSDPMVQNTQLFLDAMTFKKPKTPEKLLAPL-----KDDSMSFISKS 192
              ..|.:|.||                ::.:.|.|.||.:..|:....:     |.:....:.| 
  Fly   100 --SSSESESED----------------EVAVAARTSKKARLAERHAQKMQKLREKREKRKELRK- 145

  Fly   193 VIEGLVQGTQYVTCEELKNQ------SLLDP---------VNWETQAFADFEKNNQDIDKFP-SK 241
              :...:|.:....||..::      :||.|         |..|..|......:.:..:..| |.
  Fly   146 --QKKSKGKENDNSEESSDEHAADRFALLRPPPSDDEEEVVKAEDSADQQESTDEEAPELVPIST 208

  Fly   242 GEF--------YGLPDKVKKMILEHKGINSLYEWQDECLNLP-AIRQRKNLIYALPTSGGKTLVA 297
            ||.        .|:|..:.:.:.| :|..:  ..|.:.|.|| ||..:|:::.|..|..||||..
  Fly   209 GEAEDMSAWNGLGVPASILRALGE-QGFKT--PTQIQALTLPAAIHGKKDILGAAETGSGKTLAF 270

  Fly   298 EILMLRELL-CRERNV---LFILPYVSIVQEKVSA----MSPFAIDLDFIV----EEYTAGKGKC 350
            .|.||..:: .::||:   :...|.|...|.:.:|    ::|...:||.:.    ||..|.:   
  Fly   271 GIPMLAGIMELKQRNIRSGIRKAPKVKGQQPEPAADEHELTPPPEELDHVSGASDEESDAEE--- 332

  Fly   351 PPQPRRKRRSLF----------------------------IASIEKG-AVLMDSLIDVQRP---- 382
              |.:|.:..|:                            :|:|..| ||.....:..|.|    
  Fly   333 --QAQRVQTPLYGLVLTPTRELAVQVKNHLVAAAKYTGIRVAAIFGGLAVAKQERVLRQCPDIVV 395

  Fly   383 --------------------HEIGLVVVDELHLIGEKGRGATLEAFLTKVMFLNANIQIVGM--- 424
                                .::..:|:||...:.|||....|.:.| ||  ||::.|....   
  Fly   396 ATPGRLWELYAQGNRHLGKIEDVSFLVIDETDRMVEKGHFEELRSLL-KV--LNSDEQKKHQRQN 457

  Fly   425 ---SATIGNLSEISSFLNADVYTRGFRPVELKEYI---------KCG---PDLLEINSAGQTLE- 473
               |||:..:.::...:..  ...|.||..:|:.:         :.|   |.:::|.|:.||.: 
  Fly   458 FVYSATLTLVHDLPDHMQK--RNVGKRPKFVKQTVDQKIESLIEELGISQPKIVDITSSQQTAQT 520

  Fly   474 ----EIFVPSRSVEYNYSEAVKRADPDHLAGLISECAPEHCCLVFCPSRKNCENVALLLSRIVPK 534
                .:..|....:|:....::| .|..             .:|||.|                 
  Fly   521 LTESRLLCPIDHKDYHLYYFIQR-HPGR-------------TIVFCNS----------------- 554

  Fly   535 HKFFEHRRSEKLDLMDALDKMCGILSPVLAKTLPYGIAYHHSGLTTDER-KYIETAYRFGVVTVI 598
                       :|.:..|..:.|:|.   ...||.     |:.:...:| |.:| .:|.....::
  Fly   555 -----------IDCVKRLATLFGLLD---CNPLPL-----HANMIQKQRLKNLE-RFRDSPTGLL 599

  Fly   599 CCTSTLAAGVNLPAKRVII--RAPYVGQEFLTLCKYKQMVGRAGRAGLGEAGESILIAQSKDNLL 661
            ..|...|.|:::|....:|  :.|...:      .|....||..||             :|..:.
  Fly   600 IATDVAARGLDIPNVEHVIHYQVPRTSE------NYVHRSGRTARA-------------NKHGIT 645

  Fly   662 VGQMLFSPMD-----KALSSLDQNEAVGLQSLILSVVG-----LNLAECRRDLNRLVNSTLLSVQ 716
            |  |...|.:     |...:|::.|.:.|..::...:|     :|||   |||:           
  Fly   646 V--MFMEPGEVKSYVKLYKTLERTEDLPLFPILERFMGAVRERVNLA---RDLD----------- 694

  Fly   717 AKSLEVAVNEIVLRILREMFKNKVLQLAEPQAKSKINSSDIITSQDVSQANRPAGDRRLLIGQST 781
                            :|..|.|.:|......|......|:|    :...|..:|..:    ...
  Fly   695 ----------------KEELKLKRVQSERGWMKKHAEEMDMI----IDGYNDESGSDQ----DED 735

  Fly   782 PFKLTNIGRAAFKAGIDYKRANAIHKELKQAQQQLIL 818
            ||.:.             :|.|.:..|..:||...:|
  Fly   736 PFVIE-------------RRRNRLRVETVRAQLNALL 759

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mus301NP_648178.1 BRR2 247..998 CDD:224125 129/674 (19%)
DEXHc_POLQ-like 247..449 CDD:350784 58/273 (21%)
CG9143NP_611467.1 BLVR <125..191 CDD:283923 10/68 (15%)
SrmB 201..747 CDD:223587 130/681 (19%)
P-loop_NTPase 217..465 CDD:304359 58/258 (22%)
HELICc 531..648 CDD:238034 31/188 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24031
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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