DRSC/TRiP Functional Genomics Resources

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Protein Alignment mus301 and CG9253

DIOPT Version :9

Sequence 1:NP_648178.1 Gene:mus301 / 38905 FlyBaseID:FBgn0002899 Length:1051 Species:Drosophila melanogaster
Sequence 2:NP_610090.1 Gene:CG9253 / 35379 FlyBaseID:FBgn0032919 Length:507 Species:Drosophila melanogaster


Alignment Length:642 Identity:119/642 - (18%)
Similarity:226/642 - (35%) Gaps:236/642 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 NSASKPDEASAPTDKHQIDLADEENADKLFKKINLNDLSIAEMEDIFHGADDFSDPMVQNTQLFL 163
            :..|:.::....|...:.||..||..:.     ..|:....:.|....|.||             
  Fly     2 SETSEDEQTQLQTSDEEEDLGSEEEQED-----EDNNHKEGDSEAALSGEDD------------- 48

  Fly   164 DAMTFKKPKTPEKLLAPLKDDSMSFISKSVIEGLVQGTQYVTCEELKNQSLLDPVNWETQAFADF 228
                    |..|...|  ::..:::....:.|.|.|     .|:|||         |        
  Fly    49 --------KGSEDDAA--EEQKLTWKDLGLNEALCQ-----ACDELK---------W-------- 81

  Fly   229 EKNNQDIDKFPSKGEFYGLPDKVKKMILEHKGINSLYEWQDECLNLPAIRQRKNLIYALPTSGGK 293
                    |.|||              ::.:.|             |...|.|::|....|..||
  Fly    82 --------KAPSK--------------IQREAI-------------PVALQGKDVIGLAETGSGK 111

  Fly   294 TLVAEILMLRELLCRERNVLFILPYVSIVQEKVSAMSPFAIDLDF-IVEEYTA-GKG---KCPPQ 353
            |....:.:|..||...:.      |.::|      ::| ..:|.| |.|::.| |.|   ||   
  Fly   112 TGAFALPILHALLENPQR------YFALV------LTP-TRELAFQIGEQFEALGSGIGIKC--- 160

  Fly   354 PRRKRRSLFIASIEKGAVLMDSLIDVQRPHEIGLV---VVDELHLIGEKGRGATLEAFLTKVMFL 415
                  .:.:..::   ::...|...::||.|...   :||.|    |..:|..|:|.  |.:.:
  Fly   161 ------CVVVGGMD---MVAQGLQLAKKPHIIIATPGRLVDHL----ENMKGFNLKAI--KYLVM 210

  Fly   416 NANIQIVGMSATIGNLSEI--------SSFLNADVYTRGFRPVE---LKEYIKCGPDLLEINSAG 469
            :...:|:.|...: .|.:|        .:||.:...|:..:.::   ||:.:|     :|:::..
  Fly   211 DEADRILNMDFEV-ELDKILKVLPRERRTFLFSATMTKKVKKLQRASLKDPVK-----VEVSNKY 269

  Fly   470 QTLEE-----IFVPSRSVEYNYSEAVKRADPDHLAGLISECAPEHCCLVFCPSRKNCENVALLLS 529
            ||:|:     :|:|           ||..|. :|..:::|.| .:..::||.:..|....||:|.
  Fly   270 QTVEQLQQSYLFIP-----------VKYKDV-YLVHILNELA-GNSFMIFCSTCNNTVKTALMLR 321

  Fly   530 RI----VPKH-KFFEHRRSEKLDLMDALDKMCGILSPVLAKTLPYGIAYHHSGLTTDERKYIETA 589
            .:    :|.| :..:::|...|:...|.::                                   
  Fly   322 ALGLAAIPLHGQMSQNKRLAALNKFKAKNR----------------------------------- 351

  Fly   590 YRFGVVTVICCTSTLAAGVNLPAKRVIIR--APYVGQEFLTLCKYKQMVGRAGRAGLGEAGESIL 652
                  :::..|...:.|:::|...|::.  .|...::::      ..|||..||  |.:|::|.
  Fly   352 ------SILISTDVASRGLDIPHVDVVVNFDIPTHSKDYI------HRVGRTARA--GRSGKAIT 402

  Fly   653 IAQSKD-------NLLVGQMLFSPMDKALSSLDQNEAVGLQSLILSVVGLNLAECRR 702
            :....|       ..|:|:.|      .|...:::|.:.||.        .:||.:|
  Fly   403 LVSQYDIELYQRIEHLLGKQL------TLYKCEEDEVMALQE--------RVAEAQR 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mus301NP_648178.1 BRR2 247..998 CDD:224125 93/494 (19%)
DEXHc_POLQ-like 247..449 CDD:350784 43/217 (20%)
CG9253NP_610090.1 SrmB 34..498 CDD:223587 112/605 (19%)
DEADc 63..264 CDD:238167 58/294 (20%)
HELICc 274..403 CDD:238034 32/190 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24031
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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