DRSC/TRiP Functional Genomics Resources

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Protein Alignment mus301 and Dbp21E2

DIOPT Version :9

Sequence 1:NP_648178.1 Gene:mus301 / 38905 FlyBaseID:FBgn0002899 Length:1051 Species:Drosophila melanogaster
Sequence 2:NP_608544.1 Gene:Dbp21E2 / 33254 FlyBaseID:FBgn0086130 Length:536 Species:Drosophila melanogaster


Alignment Length:691 Identity:113/691 - (16%)
Similarity:213/691 - (30%) Gaps:236/691 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 FADTSFPSAQSVPPNSASK----PDEASAPTDKHQIDLADEENADKLFKKINLNDLSIAEMEDIF 145
            :|..:..:.::.||.:.||    ..|......:.|.||...|..|..|                 
  Fly    19 YATAAAAAVKTKPPKAKSKGKKQKGEPLISCRRSQFDLTQYEQTDAKF----------------- 66

  Fly   146 HGADDFSDPMVQNTQLFLDAMTFKKPKTPEKLLAPLKDDSMSFISKSVIEGLVQGTQYVTCEELK 210
                                                  .|:|..||..:....:|..::....::
  Fly    67 --------------------------------------GSLSLASKGWLHNKSKGDFFILNASVR 93

  Fly   211 NQSLLDPVNWETQAFADFEKNNQDIDKFPSKGEFYGLPDKVKKMILEH----KGINSLYEWQDEC 271
            .:.|              ::..|.:|:|.   |..|:  ::...:||:    .||..|...|.: 
  Fly    94 GEEL--------------QQEMQTVDEFL---ESTGM--QIHPQLLENLRVELGIKLLTGIQKQ- 138

  Fly   272 LNLPAIRQRKNLIYALPTSGGKTL-----VAEILMLRELLCRER----NVLFILPYVSIVQEKVS 327
             .:|.:...::.:.|..|..|||:     :.:.|:.:|::...:    .||.:.|...:..:...
  Fly   139 -GMPVVHGNEHCLIAAETGCGKTITYLLPIVDKLLQKEVVTERKLNTPRVLILTPGRELATQIAG 202

  Fly   328 AMSPFAIDLDFIVEEYTAGKGK-CPPQPRRKRRSLFIASIEKGAVLMDSLIDVQRPHEIGLVVVD 391
            .........:..|:....|..| ....|:.:...:.:|::  ||:.......:.|..::..:|:|
  Fly   203 VTEKLTQGTNLKVQSLLGGNTKQLMMNPQFEEVDILVATL--GALSKLVTTGIYRMEQVRHLVLD 265

  Fly   392 ELHLIGEKGRGATLEAFLTKVMF-----LNANIQIVGMSATIGNLSEISSFLNADVYTRGFRPVE 451
            |...:.:......|..||.:..|     .:|..|::..|||:                    |..
  Fly   266 EADTLLDDTFTDKLSYFLRRFPFHLVQKEDAGTQMILASATM--------------------PTN 310

  Fly   452 LKEYIKCGPDLLEINSAGQTLEEIFVPSRSVEYNYSEAVKRADPDHLAGLISECAPEHCCLVFCP 516
            .:|.:.   .:::::    |:.|:..|                  ||..|:|....:...|    
  Fly   311 TREILH---KVIDVD----TIREVVSP------------------HLHRLMSHVTQKFLRL---- 346

  Fly   517 SRKNCENVALLLSRIVPKHKFFEHRR----SEKLDLMDALDKMCGILSPVLAKTLPYGIAYHHSG 577
              ...:..|.|||.:  ||...:.|.    |.|....|.:                 .|..::||
  Fly   347 --SKADRPATLLSLV--KHDLAKRRPLIVFSNKSTTSDFV-----------------SIFLNNSG 390

  Fly   578 -----LTTDERKYIETA----YRFGVVTVICCTSTLAAGVNLPAKRVIIRAPYVGQEFLTLCKYK 633
                 |..|....|...    ::.|...|:..|...:.|::....|.::...:.    |.:..|.
  Fly   391 VNCLNLNGDMLMKIRLGRFEQFQNGHCDVLSTTDVGSRGLDTTRARHVVNFDFP----LHVSDYI 451

  Fly   634 QMVGRAGRAGLGEAGESILIAQSKDNLLVGQMLFSPMDKALSSLDQNEAVGLQSLILSVVGLNLA 698
            ...||.||.|                         .|||||.:                   ||.
  Fly   452 HRCGRIGRVG-------------------------NMDKALVT-------------------NLI 472

  Fly   699 ECRRDLN---RLVNSTLLSVQAKSLEVAVNEIV-LRILREM 735
            ..||:::   |:.::.........:...:..|: .||:.||
  Fly   473 SSRREIDVVQRIEHAARTGGLLPDVNANIRNIINKRIVAEM 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mus301NP_648178.1 BRR2 247..998 CDD:224125 90/525 (17%)
DEXHc_POLQ-like 247..449 CDD:350784 37/220 (17%)
Dbp21E2NP_608544.1 P-loop_NTPase 113..314 CDD:304359 38/226 (17%)
DEXDc 126..330 CDD:214692 39/234 (17%)
HELICc 343..462 CDD:238034 29/172 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24031
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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