DRSC/TRiP Functional Genomics Resources

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Protein Alignment mus301 and CG8611

DIOPT Version :9

Sequence 1:NP_648178.1 Gene:mus301 / 38905 FlyBaseID:FBgn0002899 Length:1051 Species:Drosophila melanogaster
Sequence 2:NP_788922.1 Gene:CG8611 / 32725 FlyBaseID:FBgn0027602 Length:975 Species:Drosophila melanogaster


Alignment Length:736 Identity:151/736 - (20%)
Similarity:275/736 - (37%) Gaps:166/736 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LSEESTS---ESHAKRQCTENLFWPEGEDDDSFFSNAHL-EDLLDGRKEELFGTQATTSTNKMTQ 75
            ||||..:   :|:.|.:....|..|    .|.|  .|.| |:....|:||..|.|..::..:..:
  Fly   159 LSEEQITRALKSNKKPKNPNQLPTP----GDLF--RAQLEEERRQKRREEGGGDQEASADEEDAK 217

  Fly    76 SGSDDGLGLFADTSFPSAQSVPPNSASKPDEASAPTDKHQIDLADE-ENADKLFKKINLNDLSIA 139
            :.|..|           :..|.|:||.|..:.|:       |:.|. |:.::........|.|.|
  Fly   218 NNSGGG-----------SPRVKPSSAVKESKKSS-------DIEDSGESGEESATSDEEPDESSA 264

  Fly   140 EMEDIFHGADDFSDPMVQNTQLFLDAMTFKKPKTPEKLLAP--LKDDSMSFISKSVIEGLVQGTQ 202
            :..    |.:  .:|          ..|.|||...|:..:.  .:...:....:|.:|.|.|   
  Fly   265 QSP----GQE--KEP----------KQTAKKPPKAEETSSTNRFRTKKIGLFDQSDVEALKQ--- 310

  Fly   203 YVTCEELKNQSLLDPVNWETQAFADFEKNNQDIDKFPSKGEFYGL-PDKVKKM--ILEHKGINSL 264
                   ..|..:.||. || .|..            ||....|| |..||.:  :|..:.:.|:
  Fly   311 -------LGQRAVKPVK-ET-IFTG------------SKISTLGLHPHAVKNLEDLLSIRELTSV 354

  Fly   265 YEWQDECLNLPAIRQRKNLIYALPTSGGKTLVAEILMLRELLCRERN---------VLFILPYVS 320
            .:     ..:|.:.|.|:::....|..|||| |..|.|.|||.:::.         .|.|:|...
  Fly   355 QQ-----KTIPEVLQGKDVLVRSQTGSGKTL-AYALPLVELLQKQQPRIQRKDGVLALVIVPTRE 413

  Fly   321 IVQEKVSAMSPFAIDLDFIVEEYTAGKGKCPPQPRRKRRSLFIASIEKGAVLMDSLIDVQ--RPH 383
            :|.:....:........:||.....|......:..|.|:.:.|.....|. |:|.|:...  :..
  Fly   414 LVMQTYELIQKLVKPYTWIVPGSLLGGESRKSEKARLRKGINILIGTPGR-LVDHLLHTASFKLT 477

  Fly   384 EIGLVVVDELHLIGEKGRGATLEAFLTKV-----------------MFLNANI-----QIVGMSA 426
            ::..:::||...:.|.|....::..:..:                 |.|:|.:     |:.|::.
  Fly   478 KLQFLILDEADRLLELGYERDVKQLVEAIDKQRAECEDKELPQLQRMLLSATLTSQVQQLAGLTL 542

  Fly   427 T----IGNLSEISS--FLNADVYTRGFRPVELKEYIKCGPDLLEINSA-GQTLEEI----FVPSR 480
            .    |.|..|.:|  ..:.|.|.        ||.|:.   |||::.. |:..|::    .:| .
  Fly   543 KNPLYIDNSDEAASAALKSKDGYQ--------KETIEA---LLEVDDGLGEYQEDVTGVLSIP-E 595

  Fly   481 SVEYNYSEAVKRADPDHLAGLIS---ECAPEHC-CLVFCPSRKNCENVALLLSRIVPKHKFFEHR 541
            :::.:|.....:.....|:.|::   :.:|:.. .:||..:.:.......:|:..:.:....|..
  Fly   596 NLQLSYVVVPPKLRLVALSSLLAKEVDASPKQFKAIVFMSTTEMVNFHHDMLNEALTRRVLDEED 660

  Fly   542 RSEKLDLMDALDKMCGILSPVLAKTLPYGIAYH--HSGLTTDERKYIETAYRFGVVTVICCTSTL 604
            ..||.|..|..|      .|:|     .|:.:.  |..:|..||:.:...:|.....|:..|..:
  Fly   661 EQEKGDSDDDGD------IPLL-----QGLRFFKLHGSMTQTERQGVFRGFRDCASCVLLATDVV 714

  Fly   605 AAGVNLPAKRVIIRAPYVGQEFLTLCKYKQMVGRAGRAGLGEAGESILIAQSKDNLLVGQMLFSP 669
            ..|:::|..:::::  |...:  |...:...|||..||  |..|.::|.....:...|..     
  Fly   715 GRGIDVPDIKLVVQ--YTPPQ--TTADFVHRVGRTARA--GRKGRAVLFLTPSEAQFVRH----- 768

  Fly   670 MDKALSSLDQNEAVG-LQSLI 689
            ::|....:.|.:... ||:|:
  Fly   769 LEKKRIRIQQGDMYAYLQTLL 789

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mus301NP_648178.1 BRR2 247..998 CDD:224125 99/497 (20%)
DEXHc_POLQ-like 247..449 CDD:350784 49/243 (20%)
CG8611NP_788922.1 DUF2413 203..>285 CDD:287302 22/115 (19%)
P-loop_NTPase 332..548 CDD:304359 44/222 (20%)
DEXDc 348..554 CDD:214692 40/212 (19%)
HELICc 601..757 CDD:238034 34/172 (20%)
DUF4217 805..866 CDD:290667
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24031
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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