DRSC/TRiP Functional Genomics Resources

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Protein Alignment mus301 and CG6227

DIOPT Version :9

Sequence 1:NP_648178.1 Gene:mus301 / 38905 FlyBaseID:FBgn0002899 Length:1051 Species:Drosophila melanogaster
Sequence 2:NP_573020.2 Gene:CG6227 / 32464 FlyBaseID:FBgn0030631 Length:1224 Species:Drosophila melanogaster


Alignment Length:769 Identity:140/769 - (18%)
Similarity:248/769 - (32%) Gaps:262/769 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 AKRQCTENLFWPEGEDDDSFFSNAHLEDLLDGRKEELFGTQATTSTNKMTQSGSDD--------- 80
            ||:...|:    |.|:|||     :....||..|::.......:..:.:.:...||         
  Fly   225 AKKWSLED----ESEEDDS-----NPAPPLDSGKKDAEPDSPPSKFHSIRKRFDDDVVESKFSPV 280

  Fly    81 ------------GLGLFADTSFPSAQSVPP-----NSASKPDEASA-------PT---------- 111
                        |:||.........:..||     ....||:..:|       ||          
  Fly   281 KRPTFSKSFGKLGIGLATKAEADIKKEPPPVDTKKEIKKKPEPVAAKMEIVEEPTVAAGEKTKKE 345

  Fly   112 ---------------DKHQIDLADEENADKLFKKINLNDLSIAEMEDIFHGADDFSDPMVQNTQL 161
                           ||.|.:...|:..|.|       |..:.|:.:.....::|.:|..::..:
  Fly   346 PEQPHVGAKSEPEVEDKPQPEAEPEDEIDPL-------DAYMQEVNNEMRRVNNFVNPPAKSQGV 403

  Fly   162 FL-------DAMTFKKPKTPEKLLAPLKDDSMSFISKSVIEGLVQGTQYVTCEELKNQSLLDPVN 219
            .:       ...|.||.:..|:.:     ||:.:.|:..:|.:......:.   :|::..|..::
  Fly   404 VILTGVAKKKTTTLKKGEVIEQNM-----DSLEYSSEDELEDIRDTAVNLA---MKHRKELAKID 460

  Fly   220 WETQAFADFEKN------------NQDIDKFPS-------KGEFYGLPDKVKKM----------- 254
            ..:..:|.|.||            ..|::|:.|       ||:  |.|..:|..           
  Fly   461 HSSVTYAPFRKNFYVEVPELTRMTAADVEKYRSDLEGIQVKGK--GCPKPIKTWAQCGVSKKEME 523

  Fly   255 ILEHKGINSLYEWQDECLNLPAIRQRKNLIYALPTSGGKTLVAEILMLRELLCRERNVLFILPYV 319
            :|...|.......|  |..:|||...::||....|..||||.                 ||||..
  Fly   524 VLRRLGFEKPTPIQ--CQAIPAIMSGRDLIGIAKTGSGKTLA-----------------FILPMF 569

  Fly   320 SIVQEKVS----------AMSP---FAIDLDFIVEEYTAGKGKCPPQPRRKRRSLFIASIEKGAV 371
            ..:.::.|          .|:|   ..:.:...:.:::...|..|            ..:..|..
  Fly   570 RHILDQPSMEDGDGAIAIIMAPTRELCMQIGKDIRKFSKSLGLRP------------VCVYGGTG 622

  Fly   372 LMDSLIDVQRPHEIGLVVVDELHLIGEKGRGATLEAFLTKVMFLNANIQIVGMSATIGNLSEISS 436
            :.:.:.:::|..||         ::...||         .:..|.||      |..:.||..::.
  Fly   623 ISEQIAELKRGAEI---------IVCTPGR---------MIDMLAAN------SGRVTNLRRVTY 663

  Fly   437 FL--NAD-VYTRGFRPVELKEYIKCGPDLLEINSAG---QTLE-----------EIFVPSRSV-- 482
            .:  .|| ::..||.|..::......||...:..:.   :.:|           |:.|..|||  
  Fly   664 VVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARRILKKPIEVIVGGRSVVC 728

  Fly   483 -EYNYSEAVKRADPD-----HLAGLISECAPEHCCLVFCPSRKNCENVALLLSRIVPKHKFFEHR 541
             |......:...|..     .|.|:..|..   ..:||...::|.:    :|.|           
  Fly   729 KEVEQHVVILNDDAKFFKLLELLGIYQEAG---SIIVFVDKQENAD----ILLR----------- 775

  Fly   542 RSEKLDLMDALDKMCGILSPVLAKTLPYGIAYHHSGLTTDERKYIETAYRFGVVTVICCTSTLAA 606
                 |||.|                .|.....|.|:...:|......::.|.|.::..||..|.
  Fly   776 -----DLMKA----------------SYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSVAAR 819

  Fly   607 GVNLPAKRVIIR--APYVGQEFLTLCKYKQMVGRAGRAG-LGEAGESILIAQSK 657
            |:::....:::.  .|...::::..|      ||.|||| .|.|...|...||:
  Fly   820 GLDVKDLILVVNYDVPNHYEDYVHRC------GRTGRAGKKGSAYTFITPEQSR 867

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mus301NP_648178.1 BRR2 247..998 CDD:224125 87/463 (19%)
DEXHc_POLQ-like 247..449 CDD:350784 41/228 (18%)
CG6227NP_573020.2 SrmB 482..967 CDD:223587 93/488 (19%)
DEADc 516..719 CDD:238167 43/257 (17%)
HELICc 733..860 CDD:238034 33/171 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24031
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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