Sequence 1: | NP_001137907.1 | Gene: | CG7504 / 38904 | FlyBaseID: | FBgn0035842 | Length: | 1676 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_998639.1 | Gene: | upf1 / 406783 | ZFINID: | ZDB-GENE-040426-2836 | Length: | 1100 | Species: | Danio rerio |
Alignment Length: | 752 | Identity: | 201/752 - (26%) |
---|---|---|---|
Similarity: | 329/752 - (43%) | Gaps: | 186/752 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 993 QDVLMPIPPEFDSFKNYREIFVPLMKLEL-------------LSTIERDYKINNKNTFSVSLINV 1044
Fly 1045 ETQDM--------CYRLVTRVNSKPFGKFVLYTLYCCGMLKETFANLLELKFVSGNVFDL--TFE 1099
Fly 1100 I--LKQDISEEKLKNIKQLTARPVVDSLRVELGALSAVHQLRSSPLCRRILKPTQTVNEVSLPKQ 1162
Fly 1163 PFTFKGCHKLNEHQENIVLHTYQRIIDDLQPSLTLIQGPPGTGKSRVISELCLQTLYGNAAKTLD 1227
Fly 1228 RKILICAHSNTAVDHIVGLLGSVLRVMNRDQFHLLRFGMHEKMSHYSRPFSLEAHFNKAKEQKLQ 1292
Fly 1293 RVSKENAEILKKQ------HNDLKD--------EIQQLKEKTNLTSTYLLQQLQQKEKKLQLISN 1343
Fly 1344 QLSPPLTQREEFEISHMCVTRANIICTTLSSCV-----KLANYVDFFDICIVDEATQCTEPWTLL 1403
Fly 1404 PMRFGLTHMVLVGDMQQLPAVVLSKKAIDFGLSNSMFDRIQRSLQTQLDKPGSYHLMHTKLFKLS 1468
Fly 1469 TQYRMHPEICRWPNQYFYEDQLINAECTA---------RFASPLIP--YCVINLKYTCDSNGAQN 1522
Fly 1523 KSISNNEEARFVAKLLTEMDKHMPSKRFSYGLISPYQNQCYALSQVI--------PSHMNITPQT 1579
Fly 1580 VDSYQGLEKDVIIISNART---RGCGFLTNYQRLNVALTRPRRCLVICGNFEDLKSVEMWRNLLD 1641
Fly 1642 DARKRKVYFNLDRDDVNDLDRSLIK----KMMVNTIN 1674 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG7504 | NP_001137907.1 | FHA | 4..96 | CDD:238017 | |
FHA | <10..101 | CDD:224630 | |||
AAA_11 | 1171..1428 | CDD:289831 | 71/275 (26%) | ||
AAA_19 | 1194..1251 | CDD:289986 | 21/56 (38%) | ||
YtxH | <1293..1347 | CDD:295162 | 12/67 (18%) | ||
AAA_12 | 1435..1626 | CDD:289832 | 65/212 (31%) | ||
upf1 | NP_998639.1 | UPF1_Zn_bind | 100..251 | CDD:286500 | |
DNA2 | 124..889 | CDD:224037 | 194/735 (26%) | ||
AAA_19 | 457..>514 | CDD:289986 | 24/80 (30%) | ||
AAA_12 | 660..857 | CDD:289832 | 67/214 (31%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1112 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D62494at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000219 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |