DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7504 and Setx

DIOPT Version :9

Sequence 1:NP_001137907.1 Gene:CG7504 / 38904 FlyBaseID:FBgn0035842 Length:1676 Species:Drosophila melanogaster
Sequence 2:XP_006233948.1 Gene:Setx / 362096 RGDID:1565575 Length:2702 Species:Rattus norvegicus


Alignment Length:1994 Identity:433/1994 - (21%)
Similarity:712/1994 - (35%) Gaps:593/1994 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 ANIIVSEKGVEVESLNPLNGLFINGGKLGDKINRLAVAEGSTISLGVT-GVNLNEITGIHAIFIL 110
            |.:.|.:|...:.|.:....:.|:..|.| |.|....|..||...|.. |.:...|...|:  :.
  Rat   682 AELGVKQKSEALLSESAPEQVKISTEKSG-KENSSYTAPNSTSRSGPEWGCDRGVIISTHS--LT 743

  Fly   111 KKKEPVVEEIVLSSDDDDTTPLPAVRCPTGTQPTEFNLKQQIPNFGGKQDPGQEEEVLPSSSNLH 175
            ......:|::..|:.|   .||     ..||..     |...|||     ..|::|:....|  |
  Rat   744 DSSSDFLEKVSTSNGD---VPL-----KDGTVG-----KTSKPNF-----KVQKDEICAKLS--H 788

  Fly   176 LPKLTEVKQEIVKH--------TSEEIQNIFGE--------------PSDAILNSVLELNPYLYN 218
            :.|....|..:|.:        .:.:::|..|.              .||::||...|       
  Rat   789 VLKKQHRKSTLVNNIIDLEENAATSDLENCSGTDRGALKKDTIEHDVSSDSVLNDDHE------- 846

  Fly   219 KLTNKTANNEITRKKIHDGDCIELDT----DTDRRSISEAQKAEDPSAEREVDDEEEYDESFAMS 279
              ..|:.|:.:.:|:|...   :||.    |.|:..|.|....:|..:..||.|      :....
  Rat   847 --EQKSKNSSLFKKEIKSE---KLDNSSFDDEDKLQIQEGHADDDLISFTEVTD------TLVKK 900

  Fly   280 QAVIREMKAEMHVSDGEEDFLLTNGMGNLPEGSPSNQA-----YDDIVYVSDSDDDELYDKVADW 339
            ......:|..:...|.|...|.:|..|.:|.  .||:|     ..|:..::              
  Rat   901 TPCEGSVKVAVESRDNEMRVLTSNLEGQVPH--DSNKALVAGPQVDLCNIT-------------- 949

  Fly   340 SKLLSQKVV---PDVIEMSQTYPLENEHK---DSDSDLDIGAKKPKRTLRISSSSDEDSADEVIV 398
              |:||..|   |..:....::.|:.:.|   .::.:.|  |...::.:.||.|.|||.|||  .
  Rat   950 --LISQTTVIQFPSGLSKQNSFQLQKDDKKCLTANHNRD--ATCHEQVIIISDSDDEDDADE--Q 1008

  Fly   399 HQTKQKG-----RRSKSKSPND---------------HVVRQADSTTP------DLPAVRKLSVS 437
            .:.|:.|     .:||....||               .:|::.::..|      :.......|.|
  Rat  1009 DEDKRCGIEGNIEQSKVSRENDCSEQHDLVVNTSVEKKLVKEEETNCPIEFEDSESQVFEFESSS 1073

  Fly   438 SIDSVYENKQTKLNSKL----KSCLKSPTKTSVDNM----ENMTETKSCSNRQREQIVASRNEP- 493
            .:.||:::.:....|.|    |||:.....::.:|:    ::::|...   |.:|:.|....|| 
  Rat  1074 EVFSVWQDHKIDSKSSLQEDQKSCIAHVADSTNNNLGCGADSVSEEVV---RNKEKGVKEHAEPH 1135

  Fly   494 -----TNICPQKIETNKTSTRKRFVSTTSRDELSTTSK-------EIKDAPKNNVEPPKKMLRSR 546
                 ...|  ||...|.. |||....|:.|....:|.       |.:|.|:.::|.....:.:.
  Rat  1136 SSVSAEGFC--KIGVRKPK-RKRCDKVTAEDPQRPSSSVRTEQLAEHRDLPERDLESADVDMAAP 1197

  Fly   547 SKSCYIDRPVELDEHITK--------NEVPLKKKYESV------DNSKEELIVTLE-APAMLTTP 596
            |.|...|..| |.:..||        .:||..|..:..      ..:|....::.. :||::  |
  Rat  1198 SSSVERDSTV-LQKKSTKPRPHSKPVRKVPASKATKKTHPDTRRGQTKSSCYISCRTSPAIV--P 1259

  Fly   597 TKSKTQCVKKKAT-----QTRGRRKTIH-SRDEIRSLTAEAEENKKISPAKQTNEEIPIPTK--S 653
            .|...||.:..:|     ..:|.||... |:..:..:....:..|.:...     |.|..||  |
  Rat  1260 PKKFRQCPEPTSTVEKLGLKKGPRKAFELSQRSLECIVQLRDHGKTVGVV-----EAPKKTKLIS 1319

  Fly   654 P----LKRNARLLNRSKSCYMDRLVISETE----------DPAKKVIK-----DISPTKSDTTDN 699
            |    :|.|.:||. |:.....||:.|.:.          |..:.|.:     |:....||..||
  Rat  1320 PQTLSIKNNKKLLT-SQDLQFQRLMRSRSHQKRDFDYKNTDSVRAVSRVVQGSDVLAADSDEPDN 1383

  Fly   700 -----VLNFVDVRQ-TRG----PSVIEAPSLPKNRG--------------------KLRGVSAEV 734
                 .|.....:| .:|    ..|.||.|.|...|                    .|.|.::|.
  Rat  1384 PGGSEPLAISSEKQLAKGTLSKAEVAEAASGPWGTGITCLVNQCESRVLSGGVPTDVLMGSASED 1448

  Fly   735 KVKDKVLDRQRFIDYQAEMNAKWKQKPKDKKKEDEK-LKECRREALKKLSEKPKENS------HR 792
            .|....|..|  :...|.:.|...:...|...:|.. |.:...:.:...|:  .|||      |:
  Rat  1449 PVGGGALTVQ--VGEVAAVRAAEPESSSDTDDDDNLFLTQHDPQDMDLCSQ--LENSKAIIVAHK 1509

  Fly   793 STTNKRKNPTSVPTVQNTNRGGFLTKGVDGPAPKLAKTDNAKPPPKKPVPKQPPAIETFSQQ--- 854
            .|. :|::..|.|.:::.:               :.|.            |....:||...|   
  Rat  1510 DTV-QREDSLSRPQLESLS---------------IIKC------------KYKDCVETTKNQGEY 1546

  Fly   855 ------LQAADKAVLHPQP-------QCSRPVERKEAELARNQRTCNKVTFAEMELYHQKAEDSK 906
                  .:|||..|.. :|       :.|||...|....:...||.|.          .|:.:|.
  Rat  1547 CPKHSEAKAADDDVFR-KPGLPLSVARSSRPTTTKIFSSSSASRTANL----------SKSLEST 1600

  Fly   907 KLQKKLRKVHFNDDVKVHCIERVKGA--------SSKVQGRKECIKLR-----------LSSYRE 952
            .||..|:             .:..||        ||.:..:|...:::           .||.::
  Rat  1601 TLQSALK-------------NKSSGAQSNLKMTPSSSLGSQKPVAEVKSLCNIFHFQTPSSSSKQ 1652

  Fly   953 RREWIRRENKPVN-----DIRQHSRSI--------LKWANQWL----KHGSVDAVAEQDVLMPIP 1000
            ..::...||:|.:     ||...|:||        |||..|..    |.|:..::. |.:..|:|
  Rat  1653 SYKFTFSENRPASAASSVDILLPSQSIFDTFIKEVLKWKYQMFLNFDKCGAPTSLC-QSISRPVP 1716

  Fly  1001 PEFDSFKNYREIFVPLMKLELLSTIERDYKINNKNTFSVSLINVETQDMCYRLVTR---VNSKPF 1062
            ..|.....|..:|:||:.|....|:.:::            :|...::..|:|..|   .:.|.:
  Rat  1717 VRFQDCAEYFNVFLPLIILNAFETVAQEW------------LNSPNKENFYQLHLRKFPADYKKY 1769

  Fly  1063 GKFVLY-----------------------------------TLYCCGMLKETFANLLELKFVSGN 1092
            .:|::|                                   :.|.||.:.: |.....::  ||.
  Rat  1770 WEFLIYLEESELAKQLHPKENDLVFLVPEKKYMDRHSVQDRSHYYCGYVHK-FRRTSVMR--SGK 1831

  Fly  1093 VFDLTFEILKQDISEEKLKNIKQLTARPVVDSLRVELGALSAVHQLRS-SPLCRRILKPTQTVNE 1156
            . :.:..|..||   ....::|:||...|:.||......|.|:..|.. :.|.|.:|.|      
  Rat  1832 T-ECSLCIQTQD---NMPASVKELTKCIVISSLVTTQRKLKAMSLLSGRNQLARAVLNP------ 1886

  Fly  1157 VSLPKQPFTFKGCHK----------------LNEHQENIVLHTYQRIIDDLQPS---LTLIQGPP 1202
                 .|..|  |.|                .||.|:..:...|..:  ...||   :.||.|||
  Rat  1887 -----NPMDF--CTKDLLTTTSERIIAYLKDFNEDQKKAIETAYAMV--KHSPSVAKICLIHGPP 1942

  Fly  1203 GTGKSRVISELCLQTL-----YGNA-----AKTLDRKILICAHSNTAVDHIVGLLGSVLRVMNRD 1257
            |||||:.|..|..:.|     .|::     ||....::|:||.||.|||.::..:          
  Rat  1943 GTGKSKTIVGLLYRLLTESQRKGHSDENFNAKIKQNRVLVCAPSNAAVDELMKKI---------- 1997

  Fly  1258 QFHLLRFGMHEKMSHYSRPFSLEAHFNKAKEQKLQRVSKE---NAEILK---------KQHNDLK 1310
               :|.|  .||......|.......|      |.|:..|   |.|:||         :...||.
  Rat  1998 ---ILEF--KEKCKDKKNPLGNCGDIN------LVRLGPEKSINTEVLKFSLDSQVSHRMKKDLP 2051

  Fly  1311 DEIQQLKEKTNLTSTYLLQ--------------QLQQKEKKLQLISNQLSPPLTQREEFE----- 1356
            ..||::..:..:....|.:              |.|:.::.:.::|.:.....::.:|.:     
  Rat  2052 SHIQEMLRRKEILDAQLDELSRQRALCRGGREMQRQELDEHIVIVSKERQELASKIKEVQGRPQR 2116

  Fly  1357 ISHMCVTRANIICTTLSSCVKLANYVDF-------FDICIVDEATQCTEPWTLLPMRFGLTHMVL 1414
            ..:..:..:::||.|||:...|.....|       |...|||||.|..|..||.|:......:||
  Rat  2117 AQNTIILESHVICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEVETLSPLIHRCNKLVL 2181

  Fly  1415 VGDMQQLPAVVLSKKAIDFGLSNSMFDRIQRSLQTQLDKPGSYHLMHTKLFKLSTQYRMHPEICR 1479
            |||.:|||..|:|.||.::|...||..|..:.|:..:::   ..:....:.:|:.||||||:||.
  Rat  2182 VGDPKQLPPTVISMKAQEYGYDQSMMARFCKLLEENVEQ---NMIGRLPVLQLTIQYRMHPDICL 2243

  Fly  1480 WPNQYFYEDQLINAEC--TARFAS--PLIPYCVINLKYTCDSNGAQ---NKSISNNEEARFVAKL 1537
            :|:.|.|...|.....  |.|.:|  |..||.|.::     .:|::   |.|..|.:|.:.|.::
  Rat  2244 FPSNYVYNKNLKTNRLTETIRCSSEWPFQPYLVFDV-----GDGSEQRDNDSYINVQEIKLVMEI 2303

  Fly  1538 L-------------------------TEMDKHMPSKRFSYGLISPY------------------Q 1559
            :                         |.:.|.:..:....||:.|.                  .
  Rat  2304 IKLIKEKRKDISFRNIGIITHYKAQKTMIQKDLEKEFDKKGLLQPIMMGESRQQDSEASKQQQKS 2368

  Fly  1560 NQCYALSQVIPSHMNITP------------------QTVDSYQGLEKDVIIISNARTR----GCG 1602
            ::|...|..:.| ..:|.                  .|||::||.:||.||::..|..    ..|
  Rat  2369 SECMHASDELDS-STVTQSGISSLENGATHTGPAEVDTVDAFQGRQKDCIIVTCVRASAVQGSIG 2432

  Fly  1603 FLTNYQRLNVALTRPRRCLVICGNFEDLKSVEMWRNLLDDARKR 1646
            ||.:.|||||.:||.:..|.|.|:...|...:.|..|:.||:||
  Rat  2433 FLASLQRLNVTITRAKYSLFILGHLRTLMENQHWYELIQDAQKR 2476

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7504NP_001137907.1 FHA 4..96 CDD:238017 13/49 (27%)
FHA <10..101 CDD:224630 14/54 (26%)
AAA_11 1171..1428 CDD:289831 80/323 (25%)
AAA_19 1194..1251 CDD:289986 25/69 (36%)
YtxH <1293..1347 CDD:295162 14/79 (18%)
AAA_12 1435..1626 CDD:289832 61/262 (23%)
SetxXP_006233948.1 SEN1_N 37..>356 CDD:289496
AAA_11 1910..2195 CDD:289831 79/307 (26%)
AAA_19 1934..>1997 CDD:289986 24/62 (39%)
AAA_12 2202..2456 CDD:289832 61/262 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 74 1.000 Domainoid score I8946
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D62494at2759
OrthoFinder 1 1.000 - - FOG0000219
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101455
Panther 1 1.100 - - LDO PTHR10887
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.920

Return to query results.
Submit another query.