DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7504 and Dna2

DIOPT Version :9

Sequence 1:NP_001137907.1 Gene:CG7504 / 38904 FlyBaseID:FBgn0035842 Length:1676 Species:Drosophila melanogaster
Sequence 2:NP_796346.2 Gene:Dna2 / 327762 MGIID:2443732 Length:1062 Species:Mus musculus


Alignment Length:1202 Identity:260/1202 - (21%)
Similarity:423/1202 - (35%) Gaps:394/1202 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   590 PAMLTTPTK--SKTQCVKKKATQTRGRRKTIHSRDEIRSLTAEAEENKKISP--AKQTNEEIPIP 650
            |.|:.:.|.  |..:|:::.......|.....:|..:..........|.||.  |.:..:|:.:.
Mouse   122 PDMMISGTSVASSIRCLRRAVLSETFRGSDPATRQMLIGTILHEVFQKAISESFAPERLQELALQ 186

  Fly   651 TKSPLKRNARLLNRSKSCYMDRLVISETEDPAKKVIKDISPTKSDTTDNVLNFVDVRQTRGPSVI 715
            |    .|..|.|..     |.||.:|:.|...:  :::..|:.|...::.:.       :||| .
Mouse   187 T----LREVRHLKE-----MYRLNLSQDEILCE--VEEYLPSFSKWAEDFMR-------KGPS-S 232

  Fly   716 EAP----SLPKNRGKLRGVSAEVKVKDKVLDRQRFIDYQAEMNAKWKQKPKDKKKEDEKL-KECR 775
            |.|    |||.: |..|.....::|. |.||.:..|         |..:...|.|.|..: .:..
Mouse   233 EFPQMQLSLPSD-GSNRSSPCNIEVV-KSLDIEESI---------WSPRFGLKGKIDVTVGVKIH 286

  Fly   776 REALKKLSEKPKE-------NS--HRS--------TTNKRKNPTSVPTVQNTNRGGFLTKGVDGP 823
            |:...|....|.|       ||  |||        :..:|::|          ..|:|.      
Mouse   287 RDCKMKYKVMPLELKTGKESNSIEHRSQVVLYTLLSQERREDP----------EAGWLL------ 335

  Fly   824 APKLAKTDNAKPPPKKPVPKQPPAIETFSQQLQAADKAVLHPQPQCSRPVERKEAELA------R 882
               ..||....|.|...:.|:  .:......|.|   ::||   :.||....:||.|:      .
Mouse   336 ---YLKTGQMYPVPANHLDKR--ELLKLRNWLAA---SLLH---RVSRAAPGEEARLSALPQIIE 389

  Fly   883 NQRTCNKVT-FAEMELYHQKAEDSKKLQKKLRKVHFNDDVKVHCIERVKGASSKVQGRKECIKLR 946
            .::||...: .....||.:..|:.            .||..:     .:...||:|  :|...|:
Mouse   390 EEKTCKYCSQIGNCALYSRAVEEQ------------GDDASI-----PEAMLSKIQ--EETRHLQ 435

  Fly   947 LSSYRERREWIRRENKPVNDIRQHSRSILKWANQWLKHGSVDAVAEQDVLMPIPPEFDSFKNYRE 1011
            |:.                         ||:.:.|.                             
Mouse   436 LAH-------------------------LKYFSLWC----------------------------- 446

  Fly  1012 IFVPLMKLELLSTIERDYKINNKNTFSVSLI---NVETQDMCYRLVTRVNSKPFGKFVLYTLYCC 1073
                     |:.|:|...|.|.|...|:.|.   .:|....|  :...|.::|..:      .|.
Mouse   447 ---------LMLTLESQSKDNRKTHQSIWLTPASELEESGNC--VGNLVRTEPVSR------VCD 494

  Fly  1074 GMLKETF---------ANLLELKFVSGNVFDLTFEILKQDISEEKL-----KNIKQLTARPVVDS 1124
            |.....|         .||:     :|:...|:.|       |.||     ..:|::....|...
Mouse   495 GQYLHNFQRKNGPMPATNLM-----AGDRIILSGE-------ERKLFALSKGYVKKMNKAAVTCL 547

  Fly  1125 LRVELGALSAVHQLR----------SSPL--CRRILK---PTQTVNEVSLPKQPFTF-------- 1166
            |...|..|.|....|          |:||  ..::::   |::.:.|:.:..:...|        
Mouse   548 LDRNLSTLPATTVFRLDREERHGDISTPLGNLSKLMESTDPSKRLRELIIDFREPQFIAYLSSVL 612

  Fly  1167 ------------KGCHKLNEHQENIVLHTYQRIIDDLQPSLTLIQGPPGTGKSRVISELCLQTLY 1219
                        ||   ||:.|...:    :|::  |....|||.|.|||||:..|..|.     
Mouse   613 PHDAKDTVANILKG---LNKPQRQAM----KRVL--LSKDYTLIVGMPGTGKTTTICALV----- 663

  Fly  1220 GNAAKTLDRKILICAHSNTAVDHIVGLLGSVLRVMNRDQFHLLRFGMHEKMSHYSRPFSLEAHFN 1284
             .........:|:.:::::|||:|       |..:.:.:...||.|    .||            
Mouse   664 -RILSACGFSVLLTSYTHSAVDNI-------LLKLAKFKVGFLRLG----QSH------------ 704

  Fly  1285 KAKEQKLQRVSKENAEILKKQHNDLKDEIQQLKEKTNLTSTYLLQQLQQKEKKLQLISNQLSPPL 1349
                               |.|.|:                       ||..:.::..::....|
Mouse   705 -------------------KVHPDI-----------------------QKFTEEEICRSRSIASL 727

  Fly  1350 TQREEFEISHMCVTRANIICTTLSSCVKLANYVDF----FDICIVDEATQCTEPWTLLPMRFGLT 1410
            ...||...||      .|:.||   |:.: |:..|    ||.||||||:|.::|..|.|:.|. .
Mouse   728 AHLEELYNSH------PIVATT---CMGI-NHPIFSRKTFDFCIVDEASQISQPVCLGPLFFS-R 781

  Fly  1411 HMVLVGDMQQLPAVVLSKKAIDFGLSNSMFDRIQRSLQTQLDKPGSYHLMHTKLFKLSTQYRMHP 1475
            ..|||||.||||.:|::::|...|:|.|:|.|::|:              .:.:.:|:.||||:.
Mouse   782 RFVLVGDHQQLPPLVVNREARALGMSESLFKRLERN--------------ESAVVQLTVQYRMNR 832

  Fly  1476 EICRWPNQYFY-------EDQLINAECT------ARFA---------SPLI--------PYCVIN 1510
            :|....|:..|       .|::.||...      ||.:         ||.:        |.|.:|
Mouse   833 KIMSLSNKLTYAGKLECGSDRVANAVLALPNLKDARLSLQLYADYSDSPWLAGVLEPDNPVCFLN 897

  Fly  1511 LKYTCDSNGAQNKSISNNEEARFVAKLLTEMDKH--MPSKRFSYGLISPYQNQCYALSQVI--PS 1571
            ..........:|..:||..|||.:..|.:...|.  .||   ..|:|:||:.|...:|.::  .|
Mouse   898 TDKVPAPEQVENGGVSNVTEARLIVFLTSTFIKAGCSPS---DIGVIAPYRQQLRIISDLLARSS 959

  Fly  1572 HMNITPQTVDSYQGLEKDVIIISNARTRGCG----FLTNYQRLNVALTRPRRCLVICGNFEDLKS 1632
            ...:...|||.|||.:|.:|::|..|:...|    .|.:::||||||||.:..|::.|:...||.
Mouse   960 VGMVEVNTVDKYQGRDKSLILVSFVRSNEDGTLGELLKDWRRLNVALTRAKHKLILLGSVSSLKR 1024

  Fly  1633 VEMWRNLLDDARKRKVYFNLDRDDVNDLDRSL 1664
            ......|.|.....::..:|...:...|...|
Mouse  1025 FPPLGTLFDHLNAEQLILDLPSREHESLSHIL 1056

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7504NP_001137907.1 FHA 4..96 CDD:238017
FHA <10..101 CDD:224630
AAA_11 1171..1428 CDD:289831 66/260 (25%)
AAA_19 1194..1251 CDD:289986 16/56 (29%)
YtxH <1293..1347 CDD:295162 5/53 (9%)
AAA_12 1435..1626 CDD:289832 61/228 (27%)
Dna2NP_796346.2 Dna2 72..283 CDD:285859 42/190 (22%)
Nuclease activity. /evidence=ECO:0000250 82..520 103/549 (19%)
Cas4_I-A_I-B_I-C_I-D_II-B <256..398 CDD:294426 38/178 (21%)
TIGR00376 472..1034 CDD:273041 163/689 (24%)
Helicase activity. /evidence=ECO:0000250 521..1062 157/651 (24%)
P-loop_NTPase 626..830 CDD:304359 77/308 (25%)
AAA_12 806..1020 CDD:289832 62/230 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1112
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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