DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7504 and Setx

DIOPT Version :9

Sequence 1:NP_001137907.1 Gene:CG7504 / 38904 FlyBaseID:FBgn0035842 Length:1676 Species:Drosophila melanogaster
Sequence 2:XP_006498142.1 Gene:Setx / 269254 MGIID:2443480 Length:2701 Species:Mus musculus


Alignment Length:1987 Identity:426/1987 - (21%)
Similarity:707/1987 - (35%) Gaps:594/1987 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 SREHANIIVSEKGVEVESLNPLNGLFINGGKLG-----------------DKINRLAVA-EGSTI 89
            ::|...|...:.|.|..|..|.|....||.:.|                 |.:.:::.: |..::
Mouse   700 AQEQVKISAEKSGKESSSYAPSNSTSRNGPEWGCDRGVIMSAHSLTDSSSDFMEQVSTSNEDVSL 764

  Fly    90 SLGVTG--------VNLNEITG--IHAIFILKKKEPVVEEIVLSSDDDDTTPLPAVRCPTGTQP- 143
            ..|..|        :..:||..  .|.|....:|..:|:.|:   |.::.|.:..:...:||.. 
Mouse   765 KDGSVGKTSKPSFKLQKDEICAKLSHVIKKQIRKSTLVDNII---DLEENTAISDLENCSGTDGG 826

  Fly   144 --TEFNLKQQIPNFGGKQDPGQEE--------------EVLPSSSNLHLPKL------------- 179
              .|.::...:|:.....|..:|:              |.|.:||:....||             
Mouse   827 ALKEDSIGHNVPSDPVLDDKHEEQKSQNSSLFKKEIKSEELDNSSSDDEDKLQIQEGRADDDLVS 891

  Fly   180 -TEVKQEIVKHTSEEIQNIFGEPSD-------AILNSVLE-------LNPYLYNK---LTNKTAN 226
             |||...:||...|....:..|..|       |:.::::|       ..|.:..:   |.|.|..
Mouse   892 FTEVTDTLVKAPCEGHVKMVVESRDKEMRESTALTSNLVEGQVPHDSSKPLVAGRQIDLCNITLI 956

  Fly   227 NEIT------------RKKIHDGD--CI----------------------ELDTDTDRRSISE-- 253
            ::.|            ..::..||  |:                      |.|.|.|.||.||  
Mouse   957 SQTTVIQFPSGLSKQNSFQLQKGDKRCLTANQNSAATCRGQVIVISDSDEEEDEDEDERSSSEEN 1021

  Fly   254 ---------------AQKAEDPSAERE-VDDEEEYDESFAMSQAVIREMKAEMHVSDGEEDFLLT 302
                           ...|.:.|.|:: |.:||.|...|..|::.:.|.::...|....:|..:.
Mouse  1022 IKQSKACIGKDCSEHRSLAVNASVEKQLVKEEERYPVEFEDSESQVFEFESSSEVFSVWQDHKID 1086

  Fly   303 NGMGNLPEGSPSNQAYDDIVYVSDSDDDEL--YDKVADWSKLLSQKVVPDVIEMSQTYPLENEHK 365
            :      :.|...:....:.:|:||.::.|  .|.|       |::||.:..|..:.:...:...
Mouse  1087 S------KNSLQGEQKSYVTHVADSTNNNLGCGDSV-------SEEVVRNKAEGVKEHAGPHSSV 1138

  Fly   366 DSDSDLDIGAKKPKRTLRISSSSDEDSADEVIVHQTKQKGRRSKSKSPNDHVVRQADSTTPDLP- 429
            .::.....|.|||||          ...|:|    |.:..:|..|....|.:..:.|.|..||. 
Mouse  1139 SAEEFCKTGVKKPKR----------KRYDKV----TAEDPQRPSSSVGTDQLPDRRDLTESDLKS 1189

  Fly   430 -----AVRKLSVSSIDSVYENKQTKLNSKLKSCLKSPT-----KTSVDNMENMTETKSCSNRQRE 484
                 |....||.. ||....|.||..:..|...|.|.     ||..|.....::: ||      
Mouse  1190 ADMGMATPSSSVER-DSTILQKSTKSRTHSKPVRKVPASKATKKTHSDTRRGQSKS-SC------ 1246

  Fly   485 QIVASRNEPTNICPQKIETNKTSTRKRFVSTTSRDELSTTSK-EIKDAPKNNVEPPKKMLRSRSK 548
             .::.|..|..:.|:|:......|             ||..| .:|.||:...|     |..||.
Mouse  1247 -YISCRTSPAIVPPKKLRQCPEPT-------------STVEKLGLKKAPRKAFE-----LSQRSL 1292

  Fly   549 SCYIDRPVELDEH---ITKNEVPLKKKY-----ESVDNSKEELIVTLEAPAMLTTPTKS-KTQCV 604
            .|.    |:|.:|   :...:.|.|.|.     .|:.|:| :|:.:.:........::| |.:..
Mouse  1293 ECI----VQLRDHGKTVGVVDAPKKAKLISPQTLSIKNNK-KLLTSQDLQFQRLMRSRSHKKRDF 1352

  Fly   605 KKKATQTRGRRKTIHSRDEIRSLTAEAEENKKISPAKQTNE-----------EIPIPTKSPLKRN 658
            ..|.|.|....:.:...|.:.:.:.|.::::...|...:||           |:...:..|....
Mouse  1353 DYKNTDTVRVSRIVQGSDVLEADSDEPDDHRVSEPLAISNEKQLAKCMLSKTEVAEASSDPWVTG 1417

  Fly   659 AR-LLNRSKSCYM------DRLVISETEDPAK-----------KVIKDISPTKSDTTDNVLNFVD 705
            .. |:|:.:|..:      |.:::|.:|||..           ..:|...|..|..||:..|...
Mouse  1418 ITCLVNQCESRVLSGGVPTDVVMVSASEDPVDGGAVTVQVGEVASVKAAEPASSSDTDDDDNLFL 1482

  Fly   706 VRQTRGPSVIEAPSLPKNRGKLRGVSAEVKVKDKVLDRQRFIDYQAEMNAKWKQKPKDKKKEDEK 770
            .:  ..|..::..|..:|:..:.....:...::..|.|.: ::..:....|:|...:..|.:.| 
Mouse  1483 TQ--HDPQDMDLCSQLENKTIIVAHKKDTVQREDSLSRPQ-LESLSITKCKYKDCVETTKNQGE- 1543

  Fly   771 LKECRREALKK-----LSEKP-----KENSHRSTTNKRKNPTSVPTVQNTNRGGFLTKGVDGPAP 825
              .|.|.:..|     |..||     .....|.||.|..:.:|.....|      |:|.::....
Mouse  1544 --YCPRHSEAKAADDGLFRKPGLPLSVARPLRPTTTKIFSSSSASRTAN------LSKSLESTTL 1600

  Fly   826 KLAKTDNAKPPPKKPVPKQPPAIETFSQQLQAADKAVLHPQPQCSRPVERKEAELARNQRTCNKV 890
            :.:...| |....:|..|..|.....||                 :||       |..:..||  
Mouse  1601 QQSALKN-KSSGAQPNLKVTPPSSMGSQ-----------------KPV-------AEVKSLCN-- 1638

  Fly   891 TFAEMELYHQKAEDSKKLQKKLRKVHFNDDVKVHCIERVKGASSKVQGRKECIKLRLSSYRERRE 955
                  ::|.:...|..                                |:..||..|       
Mouse  1639 ------IFHFQTPSSSS--------------------------------KQSCKLTFS------- 1658

  Fly   956 WIRRENKPVN-----DIRQHSRSI--------LKWANQWL----KHGSVDAVAEQDVLMPIPPEF 1003
                ||:|.:     :|...|:||        |||..|..    |.|:..::. |.:..|:|..|
Mouse  1659 ----ENRPTSAASPVNILLPSQSIFDTFIKEVLKWKYQMFLNFDKCGAPTSLC-QSISRPVPVRF 1718

  Fly  1004 DSFKNYREIFVPLMKLELLSTIERDYKIN-NKNTFSVSLINVETQDMCYRLVTR---VNSKPFGK 1064
            .....|..:|:||:.|....|:.:::..: ||..|             |:|..|   .:.|.:.:
Mouse  1719 QDCAEYFNVFLPLIILNAFETVAQEWLSSPNKENF-------------YQLQLRKFPADYKKYWE 1770

  Fly  1065 FVLY-----------------------------------TLYCCGMLKETFANLLELKFVSGNVF 1094
            |::|                                   :.|.||.:.: |.....::  ||.. 
Mouse  1771 FLIYLNESELAKQLHPKENDLVFLAPEKSYMDRHGMQDCSHYYCGYVHK-FRRTSVMR--SGKA- 1831

  Fly  1095 DLTFEILKQDISEEKLKNIKQLTARPVVDSLRVELGALSAVHQLRS-SPLCRRILKPTQTVNEVS 1158
            :.:..|..||.....:||   ||...|:.||......|.|:..|.| :.|.|.:|.|        
Mouse  1832 ECSLCIQTQDTLPASVKN---LTRCIVISSLVTTQRKLKAMSLLSSRNQLARAVLNP-------- 1885

  Fly  1159 LPKQPFTFKGCHK----------------LNEHQENIVLHTYQRIIDDLQPS---LTLIQGPPGT 1204
               .|..|  |.|                .||.|:..:...|..:  ...||   :.||.|||||
Mouse  1886 ---NPMDF--CTKDLLTTTSERIVAYLKDFNEDQKKAIETAYAMV--KHSPSVAKICLIHGPPGT 1943

  Fly  1205 GKSRVISELCLQTLYGNA----------AKTLDRKILICAHSNTAVDHIVGLLGSVLRVMNRDQ- 1258
            |||:.|..|..:.|..|.          ||....::|:||.||.|||.::..:....:...:|: 
Mouse  1944 GKSKTIVGLLYRLLTENQRKGHSDENFNAKIKQNRVLVCAPSNAAVDELMKKIILEFKEKCKDKK 2008

  Fly  1259 --------FHLLRFGMHEKMSHYSRPFSLEAHFNKAKEQKLQRVSKE---NAEILKKQHNDL--- 1309
                    .:|:|.|..:.::.....|||::..|...::.|....:|   ..|||..|.::|   
Mouse  2009 NPLGNCGDINLVRLGPEKSINTEVLKFSLDSQVNHRMKKDLPSHIQEMLRRKEILDAQLDELSRQ 2073

  Fly  1310 --------KDEIQQLKEKTNLTSTYLLQQLQQKEKKLQLISNQLSPPLTQREEFEISHMCVTRAN 1366
                    :.:.|:|.|...:.|.. .|:|..|.|::|      ..|  ||.:..|    :..::
Mouse  2074 RALCRGGREMQRQELDEHIAIVSKE-RQELASKIKEVQ------GRP--QRAQNTI----ILESH 2125

  Fly  1367 IICTTLSSCVKLANYVDF-------FDICIVDEATQCTEPWTLLPMRFGLTHMVLVGDMQQLPAV 1424
            :||.|||:...|.....|       |...|||||.|..|..||.|:......::||||.:|||..
Mouse  2126 VICCTLSTSGGLLLESAFRGQGGVPFSCVIVDEAGQSCEVETLSPLIHRCNKLILVGDPKQLPPT 2190

  Fly  1425 VLSKKAIDFGLSNSMFDRIQRSLQTQLDKPGSYHLMHTKLFKLSTQYRMHPEICRWPNQYFYEDQ 1489
            |:|.||.::|...||..|..:.|:..:::   ..:....:.:|:.||||||:||.:|:.|.|...
Mouse  2191 VISMKAQEYGYDQSMMARFCKLLEENVEQ---NMIGRLPVLQLTIQYRMHPDICLFPSNYVYNKN 2252

  Fly  1490 L------INAECTARFASPLIPYCVINLKYTCDSNGAQ---NKSISNNEEARFV---AKLLTEMD 1542
            |      .:..|::.:  |..||.|.::     .:|::   |.|..|.:|.:.|   .||:.|..
Mouse  2253 LKTNRLTESIRCSSEW--PFQPYLVFDV-----GDGSERRDNDSYINVQEIKLVMEIIKLIKEKR 2310

  Fly  1543 KHMPSKRFSYGLISPYQNQCYALSQVI-----------PSHMNITPQ------------------ 1578
            |.:..:  :.|:|:.|:.|...:.:.:           |..|..:.|                  
Mouse  2311 KDISFR--NIGIITHYKAQKTMIQKDLEKEFDKKGLLQPIMMGESRQQDSEASKQQQKSSEFMHA 2373

  Fly  1579 ------------------------------TVDSYQGLEKDVIIISNARTR----GCGFLTNYQR 1609
                                          |||::||.:||.||::..|..    ..|||.:.||
Mouse  2374 SDELGSSTVTQSGISSLENGATHTGPAEVDTVDAFQGRQKDCIIVTCVRASAVQGSIGFLASLQR 2438

  Fly  1610 LNVALTRPRRCLVICGNFEDLKSVEMWRNLLDDARKR 1646
            |||.:||.:..|.|.|:...|...:.|..|:.||:||
Mouse  2439 LNVTITRAKYSLFILGHLRTLMENQHWYELIQDAQKR 2475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7504NP_001137907.1 FHA 4..96 CDD:238017 14/78 (18%)
FHA <10..101 CDD:224630 14/83 (17%)
AAA_11 1171..1428 CDD:289831 85/315 (27%)
AAA_19 1194..1251 CDD:289986 25/69 (36%)
YtxH <1293..1347 CDD:295162 15/67 (22%)
AAA_12 1435..1626 CDD:289832 61/265 (23%)
SetxXP_006498142.1 SEN1_N 37..>334 CDD:372274
DEXXQc_SETX 1910..2235 CDD:350800 94/342 (27%)
AAA_12 2201..2455 CDD:372468 61/265 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1112
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6656
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000219
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101455
Panther 1 1.100 - - LDO PTHR10887
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.760

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