DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7504 and dna-2

DIOPT Version :9

Sequence 1:NP_001137907.1 Gene:CG7504 / 38904 FlyBaseID:FBgn0035842 Length:1676 Species:Drosophila melanogaster
Sequence 2:NP_496516.1 Gene:dna-2 / 174809 WormBaseID:WBGene00001016 Length:1069 Species:Caenorhabditis elegans


Alignment Length:1295 Identity:264/1295 - (20%)
Similarity:458/1295 - (35%) Gaps:409/1295 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   481 RQREQIVASRNEPTNICPQKIETNKTSTRKRFVSTTSRDELSTTSKE----IKDAPKNNVEPPKK 541
            ||.:.:.:..:||..:             |.....|..|..|..|.|    ...:||..:.|..:
 Worm     6 RQLQNVNSESHEPKRL-------------KEEFKGTEHDGDSVDSFENFCPTASSPKEKISPRSR 57

  Fly   542 MLRSRSKSCYIDRPVELDEHITKNEVPLKKKYESVDN----SKEELIVTLEAPAMLTTPTKSKTQ 602
            ..|.:.:.|  |.....|..:..::.|...|...|..    ..::.::.|.|     ...:.:..
 Worm    58 SERIQLQEC--DDDDSFDAPVISSKPPALPKDSGVSGFPCLFDDKNVIHLTA-----RKGEKRDD 115

  Fly   603 CVKKKATQTRGRRKTIHSRDEIRSLTAEAEENKKISPAKQ-------TNEEIPIPTKSPLKRNAR 660
            |:..:.....|..:.::.:|....::.||.....:..|:.       .|:::.|...:|      
 Worm   116 CLDLECIDKEGTTRIVYLQDHWSEMSIEAGSTINLIGAQAWGDRDFLVNDDVGIVILNP------ 174

  Fly   661 LLNRSKSCYMDRL-----VISETEDPAKKVIKD-------------------------ISPTKSD 695
                      |.|     |.|.|....|.|:.|                         |:..|..
 Worm   175 ----------DALVPCTAVASATFCARKTVLNDKFKFGNASNKAMLLGTIMHEIFQTAITSKKRP 229

  Fly   696 TTDNVLNFVDVRQ-----------TRGPSVIEAPSLP--------------------KNRGKLRG 729
            ..:|.|..:..:|           :..||.::|...|                    ..|..|..
 Worm   230 VMENDLMKIWNKQAPKYAEELVALSFTPSCLDAELQPYFSIICGWINKHYPLSNSFFSKREPLPS 294

  Fly   730 VSAEVKVKDKVLDRQRFIDYQAEMNAKWKQKPKDKKKEDEKLKECRREALKKLSEKPKENSHRS- 793
            .|..::|            |..|.|. |..|...|.|.|..::...|..::.|..|..::|..| 
 Worm   295 KSELLEV------------YDIEENI-WDSKLGLKGKIDVTMRTKSRGGMESLELKTGKSSCSSE 346

  Fly   794 -----------TTNKRKNPTSVPTVQNTNRGGFLTKGVDGPAPKLAKTDNAKPPPKKPVPKQPPA 847
                       .:::.:.|.                   ||...|...|.|..      ...|.|
 Worm   347 HTGQVLLYCMMQSSRYEQPI-------------------GPGNILYLKDGASH------CVTPRA 386

  Fly   848 IETFSQQLQAADKAVLH-PQPQCSR-PVERKEAELARNQRTCNKVTFAEMELYHQKAEDS-KKLQ 909
            .:... .||..:|..:| ..|..|. |..|:::      |.|:|.....|..::||.|:: .|..
 Worm   387 ADLLG-VLQQRNKLSVHFEDPTTSNLPDPRQDS------RFCDKCDHKTMCSFYQKTEENFSKSN 444

  Fly   910 KKLRKVHFNDDVKVHCIERVKGASSKVQGRKECIKLRLSSYRERREWIRRENKPVNDIRQHSRSI 974
            .|::  :|.::...| :|:     :.::.....|:...:.::..||.:..:||.:          
 Worm   445 DKMK--NFAENEMAH-LEQ-----NHIEYAANWIRWISAEWKCERERMTSQNKDL---------- 491

  Fly   975 LKWANQWLKHGSV-DAVAEQDVLMPIPPEFDSFKNYREIFVPLMKLELLSTIERDYK------IN 1032
                  |||  || :.|.|...|..:.|..:...|.::|.:...:..|.|:....::      ::
 Worm   492 ------WLK--SVQERVEEGTCLSDLHPVSEEMSNSQKIIISFSRKFLKSSNTPTFRPGDVCLLS 548

  Fly  1033 NKNTFSV--SLIN-VETQDMCYRLVT--RVNSKPFGKFVLYTLYCCGMLKETFANLLELKFVSGN 1092
            ||...::  :||: |.......::.|  .:.|:....|.|...........|..||:.|      
 Worm   549 NKKHIAIGFALIDEVSDDQQIVKISTDKTIKSRYEAPFHLDKYTSMSTHSTTLGNLVYL------ 607

  Fly  1093 VFDLTFEILKQDISEEKLKNIKQLTARPVV-DSLRVELGALSAVHQLRSSPLCRRILKPTQTVNE 1156
                    |:.|...::|:||......|:: |:....|           :|..::|:...     
 Worm   608 --------LQNDEIGKRLRNILVDLLPPIIMDATGFNL-----------TPAIKKIIIKA----- 648

  Fly  1157 VSLPKQPFTFKGCHKLNEHQENIVLHTYQRIIDDLQPSLTLIQGPPGTGKSRVISELCLQTLYGN 1221
                          |||..|...|:|..  ..:|..    :::|.||:||:.:||.| :|.|...
 Worm   649 --------------KLNNEQRKAVVHAL--ATEDFM----MVEGLPGSGKTTLISVL-IQCLVAT 692

  Fly  1222 AAKTLDRKILICAHSNTAVDHIVGLLGSVLRVMNRDQFHLLRFGMHEKMSHYSRPFSLEAHFNKA 1286
                 ::|:|:.|.:::|||:|                                           
 Worm   693 -----NKKVLLAAFTHSAVDNI------------------------------------------- 709

  Fly  1287 KEQKLQRVSKENA--EILK-KQHNDLKDEIQQLKEKTNLTSTYLLQQLQQKEKKLQLISNQLSPP 1348
                |.:::||.|  :||: ...:.:||:|:::..|..|                   .|:.|  
 Worm   710 ----LTKLTKEVAAEKILRLGSSSSIKDDIKKMTLKAKL-------------------ENETS-- 749

  Fly  1349 LTQREEF--EISHMCVTRANIICTTLSSCVKLANYVDF----FDICIVDEATQCTEPWTLLPMRF 1407
                ||:  .:..:..|...:.||    |..:...:.|    ||:.|||||:...|| .|||:..
 Worm   750 ----EEYYAAVRKVMKTTPIVACT----CHHVPRELLFSYRHFDVVIVDEASMVLEP-LLLPVLA 805

  Fly  1408 GLTHMVLVGDMQQLPAVVLSKKAIDFGLSNSMFDRIQRSLQTQLDKPGSYHLMHTKLFKLSTQYR 1472
            .....|||||.:||..:|:|:||...|...|..:::|:|      .||       .:..|::|||
 Worm   806 TSNKFVLVGDCKQLTPLVVSRKAKQEGAGISTMEKLQQS------HPG-------VVVSLTSQYR 857

  Fly  1473 MHPEICRWPNQYFYEDQLI-NAECTAR-----------------------FASPLIPYCV----- 1508
            |:.||....::.|||::|| ..|..:|                       .:..:...||     
 Worm   858 MNREISVLSSKLFYENRLICGNESVSRSSLDRTGDYIVAMDDGSDHIRKALSGDIKDSCVFLDTQ 922

  Fly  1509 --INLKYTCDSNGAQNKSISNNEEARFVAKLLTE--MDKHMPSKRFSYGLISPYQNQCYALSQVI 1569
              ||.|..|:.  .:...:.|:.||:.:::|..:  |....|.:   .|::|.|:.|...:..::
 Worm   923 STINSKMQCED--GEGGGMCNDGEAKLISELCQQFVMSGVKPHE---IGVMSAYRRQVDHIRGIL 982

  Fly  1570 PSHMNITPQTVDSYQGLEKDVIIIS----NARTRGCGFLTNYQRLNVALTRPRRCLVICG 1625
            .|. .:...|:|||||.||.|||.|    |..|:....|.:.:|:||||||.|:.||:.|
 Worm   983 NSD-ELEVNTIDSYQGREKRVIIWSLTWTNNSTKKSELLKDERRVNVALTRARQKLVVVG 1041

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7504NP_001137907.1 FHA 4..96 CDD:238017
FHA <10..101 CDD:224630
AAA_11 1171..1428 CDD:289831 64/265 (24%)
AAA_19 1194..1251 CDD:289986 17/56 (30%)
YtxH <1293..1347 CDD:295162 11/56 (20%)
AAA_12 1435..1626 CDD:289832 62/228 (27%)
dna-2NP_496516.1 Dna2 122..325 CDD:285859 37/231 (16%)
Cas4_I-A_I-B_I-C_I-D_II-B <294..430 CDD:294426 34/180 (19%)
TIGR00376 480..1062 CDD:273041 170/732 (23%)
P-loop_NTPase 650..861 CDD:304359 77/312 (25%)
AAA_12 834..1044 CDD:289832 62/227 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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