DRSC/TRiP Functional Genomics Resources

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Protein Alignment ldbr and dbr1

DIOPT Version :9

Sequence 1:NP_996022.1 Gene:ldbr / 38900 FlyBaseID:FBgn0035838 Length:534 Species:Drosophila melanogaster
Sequence 2:NP_955947.1 Gene:dbr1 / 323746 ZFINID:ZDB-GENE-030131-2466 Length:568 Species:Danio rerio


Alignment Length:613 Identity:253/613 - (41%)
Similarity:328/613 - (53%) Gaps:129/613 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKIAVEGCAHGELERIYDTIEGIEKVGGTKIDLLLCCGDFQSTRNLEDLQTMAVPKKYLDMCSFY 65
            ||:|||||.||||::||::|..:|...|.|:||||||||||:.||..|::.||||.||..|.:||
Zfish     1 MKVAVEGCCHGELDKIYESISYLENKDGVKVDLLLCCGDFQAVRNEGDMKCMAVPAKYRHMQTFY 65

  Fly    66 KYYSGELVAPVLTIFIGGNHEASNYLQELPYGGWVAPNIYYLGYAGVVNVNGVRIAGISGIFKGH 130
            ||||||..||||||||||||||||:||||||||||||||||||||||:...||||.|:|||||.|
Zfish    66 KYYSGEKKAPVLTIFIGGNHEASNHLQELPYGGWVAPNIYYLGYAGVIRYKGVRIGGLSGIFKSH 130

  Fly   131 DFLRGHHEFPPYTDSTCRSVYHVRQLEVFRLKQISGRVDIFLSHDWPTGIYEYGNKAQLLRKKPF 195
            ||.:||.|||||...|.|||||:|.::||:||||...:|||::||||.|||.|||...|||:|.|
Zfish   131 DFKKGHFEFPPYNPETLRSVYHIRNIDVFKLKQIKMPIDIFMTHDWPRGIYHYGNTNALLRQKKF 195

  Fly   196 FAADMESGKLGSQPLEELLKAVQPAYWFAAHLHCKFAALVPHNHSQKLGDAESSSSSSSSEDEDE 260
            ...::||..|||....:||:.:||:|||:||||.|||||:.|                       
Zfish   196 LRQEVESSTLGSPAAADLLEHLQPSYWFSAHLHVKFAALMQH----------------------- 237

  Fly   261 EREKVKKAAPVPPPSKSVPVTKFLALDKCLPRRAFLQVVEVPSDPIEGTPRLEYDAEWLAILHST 325
              |.....||        .:||||:||||||.|.|||:|||...| ..:.:||||.||||||.:|
Zfish   238 --EAKNNTAP--------KITKFLSLDKCLPHRDFLQIVEVADRP-GSSEQLEYDPEWLAILKAT 291

  Fly   326 NHLISVKENYYYLPGKKAGEFTERSNFTPTEEE-LEAVTAKFQKLQVPENFERTVPAFDPAEQSD 389
            ::|.....|::..|  :......|.:|:.:||. :|.|:.....|.:||||..|||.:||::...
Zfish   292 DNLQKPTCNFWNPP--QDNGLHSRWDFSASEEAMMEVVSDLSGDLCIPENFSLTVPPYDPSQPQP 354

  Fly   390 YKHMFVDQPKVQLNPQSNTFCATLGIDDPLCLVLLANGL-----DLPAVGATECKDRETKSSK-- 447
            :.     .|....|||:...||||.:.|   :.:||...     :....||||.:|.|..:..  
Zfish   355 HA-----LPAYSTNPQTTELCATLNLTD---IYILAGQSGQIYGERGGKGATEEEDEEDSTGSAD 411

  Fly   448 ------------------------------------------LQAV-----------------EE 453
                                                      :.||                 :.
Zfish   412 EPSDFPSDTSGLSSSYNPDEITIEDEWEEEEDGGVGCGEGKGMDAVVPEGQVGSQDSDRDSSPQR 476

  Fly   454 DVAEPLVTP-------TKRKLN----LSLPAPTTAAADTTDENVIDLPEEEA-EEAIIATETPHV 506
            :.|:.|:.|       |:..|:    ||||.|:...:..:.|      ||.| ..|.:...|...
Zfish   477 ETAKRLILPAPCAKPKTEAPLHSLPRLSLPPPSACVSQGSSE------EEGAFTAARVPKRTSGE 535

  Fly   507 EEPASVPASPNVKKLKRRNQNIYQAQED 534
            ...:|...:....::|||||:||.|.||
Zfish   536 TTQSSAGQTGGTPQIKRRNQSIYTAVED 563

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ldbrNP_996022.1 Metallophos 1..229 CDD:278574 149/227 (66%)
MPP_Dbr1_N 3..296 CDD:277322 168/292 (58%)
DBR1 281..416 CDD:282819 56/135 (41%)
dbr1NP_955947.1 Metallophos 1..229 CDD:278574 149/227 (66%)
MPP_Dbr1_N 3..263 CDD:277322 168/292 (58%)
DBR1 245..376 CDD:282819 57/146 (39%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 388..568 35/182 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595280
Domainoid 1 1.000 330 1.000 Domainoid score I1132
eggNOG 1 0.900 - - E1_KOG2863
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9428
Inparanoid 1 1.050 417 1.000 Inparanoid score I1787
OMA 1 1.010 - - QHG48623
OrthoDB 1 1.010 - - D1047278at2759
OrthoFinder 1 1.000 - - FOG0004461
OrthoInspector 1 1.000 - - oto41159
orthoMCL 1 0.900 - - OOG6_102255
Panther 1 1.100 - - LDO PTHR12849
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R294
SonicParanoid 1 1.000 - - X3163
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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