DRSC/TRiP Functional Genomics Resources

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Protein Alignment KRT84 and Lam

DIOPT Version :9

Sequence 1:NP_149034.2 Gene:KRT84 / 3890 HGNCID:6461 Length:600 Species:Homo sapiens
Sequence 2:NP_001245892.1 Gene:Lam / 33782 FlyBaseID:FBgn0002525 Length:622 Species:Drosophila melanogaster


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
KRT84NP_149034.2 Head 1..165
Keratin_2_head 16..161 CDD:292825
Filament 165..475 CDD:278467
Coil 1A 166..200
Linker 1 201..210
Coil 1B 211..311
DUF5082 215..315 CDD:293493
Nnf1 293..411 CDD:281911
Linker 12 312..328
Coil 2 329..472
RILP-like <375..>444 CDD:304877
Tail 473..600
LamNP_001245892.1 Filament 54..409 CDD:278467
Ax_dynein_light <283..377 CDD:287215
LTD 466..572 CDD:279300
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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