DRSC/TRiP Functional Genomics Resources

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Protein Alignment RHOC and Mtl

DIOPT Version :10

Sequence 1:NP_786886.1 Gene:RHOC / 389 HGNCID:669 Length:193 Species:Homo sapiens
Sequence 2:NP_524533.1 Gene:Mtl / 43319 FlyBaseID:FBgn0039532 Length:195 Species:Drosophila melanogaster


Alignment Length:188 Identity:108/188 - (57%)
Similarity:135/188 - (71%) Gaps:1/188 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRP 71
            |.|:||||..||||:||.::.|.||..||||||:||.|.::||..||.|.|||||||||||||||
  Fly     8 KCVVVGDGTVGKTCMLISYTTDCFPGEYVPTVFDNYSAPMQVDTIQVSLGLWDTAGQEDYDRLRP 72

Human    72 LSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQDEHTRRELAKMKQ 136
            ||||.|||.|:|:|:.||.|.||:..||.||:||.||:.||||||.|.|||:|..|...||:...
  Fly    73 LSYPQTDVFLICYSVASPSSFENVTSKWYPEIKHHCPDAPIILVGTKIDLREDRETLSGLAEQGL 137

Human   137 EPVRSEEGRDMANRISAFGYLECSAKTKEGVREVFEMATRAGLQVRKNKRR-RGCPIL 193
            .|::.|:|:.:||:|.|..|:||||.|:.|::.|||.|.||.|:....||| |.|.|:
  Fly   138 TPLKREQGQKLANKIRAVKYMECSALTQRGLKPVFEEAVRAVLRPEPLKRRQRKCLIM 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RHOCNP_786886.1 RhoA_like 5..179 CDD:206662 101/171 (59%)
Effector region. /evidence=ECO:0000255 34..42 6/7 (86%)
MtlNP_524533.1 RHO 9..182 CDD:197554 101/172 (59%)

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