DRSC/TRiP Functional Genomics Resources

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Protein Alignment RHOC and RhoL

DIOPT Version :10

Sequence 1:NP_786886.1 Gene:RHOC / 389 HGNCID:669 Length:193 Species:Homo sapiens
Sequence 2:NP_001247003.1 Gene:RhoL / 41136 FlyBaseID:FBgn0014380 Length:214 Species:Drosophila melanogaster


Alignment Length:187 Identity:90/187 - (48%)
Similarity:125/187 - (66%) Gaps:9/187 - (4%)


- Green bases have known domain annotations that are detailed below.


Human     7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRP 71
            |:.|||||..||||:||.:::::|||.|:||||:|:..:|.||.:...|.||||||||||:||||
  Fly    37 KITIVGDGMVGKTCMLITYTRNEFPEEYIPTVFDNHACNIAVDDRDYNLTLWDTAGQEDYERLRP 101

Human    72 LSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQDEHTRRELAKMKQ 136
            ||||.|:..|:|:||.|..|.||:..||.||::||..:||::|||.|.|||         ....:
  Fly   102 LSYPSTNCFLLCYSISSRTSFENVKSKWWPEIRHFSAHVPVVLVGTKLDLR---------IPNSE 157

Human   137 EPVRSEEGRDMANRISAFGYLECSAKTKEGVREVFEMATRAGLQVRKNKRRRGCPIL 193
            :.|.::||:.|...|.||..:|||||.|:.:::|||.|.||..:..|...::.|.||
  Fly   158 KFVTTQEGKKMRKEIHAFNLVECSAKKKQNLQQVFEEAVRAVERKPKTTSKQSCKIL 214

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RHOCNP_786886.1 RhoA_like 5..179 CDD:206662 86/171 (50%)
Effector region. /evidence=ECO:0000255 34..42 5/7 (71%)
RhoLNP_001247003.1 Rho 36..198 CDD:206641 84/169 (50%)

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