DRSC/TRiP Functional Genomics Resources

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Protein Alignment RHOC and Cdc42

DIOPT Version :10

Sequence 1:NP_786886.1 Gene:RHOC / 389 HGNCID:669 Length:193 Species:Homo sapiens
Sequence 2:NP_523414.1 Gene:Cdc42 / 32981 FlyBaseID:FBgn0010341 Length:191 Species:Drosophila melanogaster


Alignment Length:187 Identity:96/187 - (51%)
Similarity:129/187 - (68%) Gaps:0/187 - (0%)


- Green bases have known domain annotations that are detailed below.


Human     7 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYIADIEVDGKQVELALWDTAGQEDYDRLRP 71
            |.|:|||||.|||||||.::.::||..||||||:||...:.:.|:...|.|:|||||||||||||
  Fly     5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNYAVTVMIGGEPYTLGLFDTAGQEDYDRLRP 69

Human    72 LSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRQDEHTRRELAKMKQ 136
            ||||.|||.|:|||:.||.|.||:.|||.||:.|.|...|.:|||.:.|||.:..|..:|||.||
  Fly    70 LSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHCQKTPFLLVGTQIDLRDENSTLEKLAKNKQ 134

Human   137 EPVRSEEGRDMANRISAFGYLECSAKTKEGVREVFEMATRAGLQVRKNKRRRGCPIL 193
            :|:..|:|..:|..:.|..|:||||.|::|::.||:.|..|.|:..:..::|.|..|
  Fly   135 KPITMEQGEKLAKELKAVKYVECSALTQKGLKNVFDEAILAALEPPEPTKKRKCKFL 191

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RHOCNP_786886.1 RhoA_like 5..179 CDD:206662 92/171 (54%)
Effector region. /evidence=ECO:0000255 34..42 6/7 (86%)
Cdc42NP_523414.1 Cdc42 3..177 CDD:206664 92/171 (54%)

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