DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp3 and ARP1

DIOPT Version :10

Sequence 1:NP_523968.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_011997.1 Gene:ARP1 / 856530 SGDID:S000001171 Length:384 Species:Saccharomyces cerevisiae


Alignment Length:400 Identity:128/400 - (32%)
Similarity:210/400 - (52%) Gaps:47/400 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVGDTNTRRI-TKGIEDLDFFIGDEAFDATG- 71
            |||.|:|..|.||:|.:.|:.:        |...||:|...:: .:|::. |.|||:.|....| 
Yeast    16 VIDNGSGIIKAGFSGEERPKAL--------EYCLVGNTKYDKVMLEGLQG-DTFIGNNAQKLRGL 71

  Fly    72 YSIKYPVRHGLVEDWDLMERFLEQCVFKYLRAEP-EDHYFLLTEPPLNTPENREYTAEIMFETFN 135
            ..::||::||:|||||.||......:.:.|:.:. .:|..|:||.|:|..:|||..|:::||||:
Yeast    72 LKLRYPIKHGVVEDWDSMELIWSYVLNEVLQLQNIGEHPLLITEAPMNPLKNREQMAQVLFETFD 136

  Fly   136 VPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRNI 200
            |..||::..|||:|.||       .|| ||.|||.|:|....:|:.:|:.:.:.:..:.|.|.:|
Yeast   137 VSALYVSNPAVLSLYAS-------GRT-TGCVVDCGEGYCSTVPIYDGFALPASMMRMDIGGADI 193

  Fly   201 TSFIQSLLRERE-VGIPPEQSLETAKAIKEKHCYICPDIAKEFAKYDTEPGKWIRNFSGVNTVTK 264
            |..:|..||:.. |.:......|..:.:|||.||:..:|.||..||       ::....:.:..|
Yeast   194 TEQLQFQLRKSAGVSLFSSSEREIVRTMKEKVCYLAKNIKKEEEKY-------LQGTQDLISTFK 251

  Fly   265 APFN--VDVGYERFLGPEIFFHPEFSNPDFTIPLSEIVDNVIQNCPIDVRRPLYNNIVLSGGSTM 327
            .|..  ::||.:|:..|||.|.|:.....:. .||::....|....:|:|:||.::|:||||:|.
Yeast   252 LPDGRCIEVGNDRYRAPEILFSPQIIGLGYD-GLSDMCMQSIWKVDLDLRKPLLSSIILSGGTTT 315

  Fly   328 FKDFGRRLQRDIKRSVDTRLRISENLSEGRIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQ 392
            .|.||.|:..|:           |.|::|..|     :::|....::|..|.|||:|.....|.:
Yeast   316 LKGFGDRMLWDL-----------EALTKGTSK-----IKIIAPSERKYTTWIGGSILTGLSTFQR 364

  Fly   393 VCHTKAAYEE 402
            :...|:.:.|
Yeast   365 LWTKKSDWLE 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp3NP_523968.1 ASKHA_NBD_Arp3-like 7..410 CDD:466822 127/399 (32%)
ARP1NP_011997.1 ASKHA_NBD_Arp1 12..379 CDD:466820 127/399 (32%)

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