DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp3 and ARP7

DIOPT Version :9

Sequence 1:NP_001261559.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_015359.1 Gene:ARP7 / 856146 SGDID:S000006238 Length:477 Species:Saccharomyces cerevisiae


Alignment Length:495 Identity:102/495 - (20%)
Similarity:161/495 - (32%) Gaps:167/495 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVGDT-----NTRRITKGIEDLDFFIGDEAFD 68
            ||..|:..:..||:..:.||.||||:. ||.:...|:.     ....|....|..:   |||.:.
Yeast     9 VIHNGSHRTVAGFSNVELPQCIIPSSY-IKRTDEGGEAEFIFGTYNMIDAAAEKRN---GDEVYT 69

  Fly    69 ATGYSIKYPVRHGLVEDWDLMERFLEQCVFKYLRAEPEDHYFLLTEPPLN-TPE----NREYTAE 128
            ...       ..||..:||.:|..........|:..||:...::|.|..| .|:    .|.|  |
Yeast    70 LVD-------SQGLPYNWDALEMQWRYLYDTQLKVSPEELPLVITMPATNGKPDMAILERYY--E 125

  Fly   129 IMFETFNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIGSCIKHI 193
            :.|:..|||...|.::. ||:|.|....||       .|:|.|....:|.|:.:|.|:.:.:...
Yeast   126 LAFDKLNVPVFQIVIEP-LAIALSMGKSSA-------FVIDIGASGCNVTPIIDGIVVKNAVVRS 182

  Fly   194 PIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKEFAKYDT----EPGKWIR 254
            ...|    .|:...:.||           .|..|||::  ...::|.| .|..|    |...||:
Yeast   183 KFGG----DFLDFQVHER-----------LAPLIKEEN--DMENMADE-QKRSTDVWYEASTWIQ 229

  Fly   255 NFSGV---------------------------------------NTVTKAPFNVDVGYERFL--- 277
            .|...                                       ..:|.:|.|..|..:.||   
Yeast   230 QFKSTMLQVSEKDLFELERYYKEQADIYAKQQEQLKQMDQQLQYTALTGSPNNPLVQKKNFLFKP 294

  Fly   278 --------------GPEIFFHPE-----FSNPDFTIPL--------------------------- 296
                          ..|..|.|:     ||..|...||                           
Yeast   295 LNKTLTLDLKECYQFAEYLFKPQLISDKFSPEDGLGPLMAKSVKKAGASINSMKANTSTNPNGLG 359

  Fly   297 -SEIVDNVIQN---------CPIDVRRPLYNNIVLSGGSTMFKDFGRRLQRDIK-RSVDTRLRIS 350
             |.|..||..|         .|..|...|..|::::|.:::.:...:|:.:::. |....:|...
Yeast   360 TSHINTNVGDNNSTASSSNISPEQVYSLLLTNVIITGSTSLIEGMEQRIIKELSIRFPQYKLTTF 424

  Fly   351 ENLSEGRIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEF 390
            .|             ||:..  ::...|.|...:|:.|.:
Yeast   425 AN-------------QVMMD--RKIQGWLGALTMANLPSW 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp3NP_001261559.1 PTZ00280 2..417 CDD:240343 102/495 (21%)
ARP7NP_015359.1 COG5277 1..471 CDD:227602 102/495 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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