DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp3 and ARP9

DIOPT Version :9

Sequence 1:NP_001261559.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_013747.1 Gene:ARP9 / 855049 SGDID:S000004636 Length:467 Species:Saccharomyces cerevisiae


Alignment Length:456 Identity:86/456 - (18%)
Similarity:160/456 - (35%) Gaps:132/456 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 FAGNKE----PQFIIPSAIAIKESARVGDTNTRRITKGIEDLDFFIGDEAFDATGYSIK----YP 77
            |..|:|    |:..||             |...|.|:  :|     |...:.:|....|    .|
Yeast    23 FGLNEETFTVPELEIP-------------TQIYRTTR--QD-----GSYTYHSTNKDNKAELIKP 67

  Fly    78 VRHGLVEDWDLMERFLEQCVFKYL--RAEPEDHYF--LLTEPPLN-------TPENREYTAEIMF 131
            :::|.:.|.....:||.......|  ||......|  .|:..||.       :..:.|...:.:|
Yeast    68 IQNGEIIDISAFTQFLRLIFVSILSDRANKNQDAFEAELSNIPLLLITHHSWSQSDLEIITQYVF 132

  Fly   132 ETFNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIGSCIKHIPIA 196
            |:..:..|   :|...:|||:::..|.:    ...::|.|...|.:||:.:...:...:..||:.
Yeast   133 ESLEINNL---IQLPASLAATYSMISLQ----NCCIIDVGTHHTDIIPIVDYAQLDHLVSSIPMG 190

  Fly   197 GRNITSFIQSLLREREVGIPPEQSLETAKAIKEKHCY-ICPDIAKEFAKYD-------------- 246
            |::|...::.||        |:...:..:::|:...: :..|.||:.:.:|              
Yeast   191 GQSINDSLKKLL--------PQWDDDQIESLKKSPIFEVLSDDAKKLSSFDFGNENEDEDEGTLN 247

  Fly   247 -----------------TEPGKWIRNFSG----VNTVTKAPFN-VDVGYERFLGPEIFFHPEFSN 289
                             .|.|:.::|...    .||......| :.||.:||.|           
Yeast   248 VAEIITSGRDTREVLEERERGQKVKNVKNSDLEFNTFWDEKGNEIKVGKQRFQG----------- 301

  Fly   290 PDFTIPLSEIVDNVIQNC------------PIDVRRPLYNNIVLSGGSTMFKDFGRRLQRDIKRS 342
                      .:|:|:|.            .|:..:.::.||::.||:|....|...|...:.:.
Yeast   302 ----------CNNLIKNISNRVGLTLDNIDDINKAKAVWENIIIVGGTTSISGFKEALLGQLLKD 356

  Fly   343 VDTRLRISENLSEGRIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHT---KAAYEEYG 404
             ...:...|..|:...:.|.: :...|....::..  ..:....|.|:.| |.|   .|.|.:|.
Yeast   357 -HLIIEPEEEKSKREEEAKSV-LPAATKKKSKFMT--NSTAFVPTIEYVQ-CPTVIKLAKYPDYF 416

  Fly   405 P 405
            |
Yeast   417 P 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp3NP_001261559.1 PTZ00280 2..417 CDD:240343 86/456 (19%)
ARP9NP_013747.1 COG5277 1..467 CDD:227602 86/456 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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