DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp3 and ACT1

DIOPT Version :9

Sequence 1:NP_001261559.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_116614.1 Gene:ACT1 / 850504 SGDID:S000001855 Length:375 Species:Saccharomyces cerevisiae


Alignment Length:421 Identity:153/421 - (36%)
Similarity:217/421 - (51%) Gaps:60/421 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAGRLPACVIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVGDTNTRRITKGIEDLDFFIGDE 65
            |...:.|.|||.|:|..|.||||:..|:.:.||.        ||....:.|..|:...|.::|||
Yeast     1 MDSEVAALVIDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGIMVGMGQKDSYVGDE 57

  Fly    66 AFDATG-YSIKYPVRHGLVEDWDLMERFLEQCVFKYLRAEPEDHYFLLTEPPLNTPENREYTAEI 129
            |....| .:::||:.||:|.:||.||:......:..||..||:|..||||.|:|...|||...:|
Yeast    58 AQSKRGILTLRYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKSNREKMTQI 122

  Fly   130 MFETFNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIGSCIKHIP 194
            ||||||||..|:::||||:|.:|       .|| ||||:|||||||||:|:..|:.:...|..|.
Yeast   123 MFETFNVPAFYVSIQAVLSLYSS-------GRT-TGIVLDSGDGVTHVVPIYAGFSLPHAILRID 179

  Fly   195 IAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKEF----------AKYDTEP 249
            :|||::|.::..:|.||..........|..:.||||.||:..|..:|.          ..|:...
Yeast   180 LAGRDLTDYLMKILSERGYSFSTTAEREIVRDIKEKLCYVALDFEQEMQTAAQSSSIEKSYELPD 244

  Fly   250 GKWIRNFSGVNTVTKAPFNVDVGYERFLGPEIFFHPEFSNPDFTIPLSEIVDNVIQNCPIDVRRP 314
            |:.|                .:|.|||..||..|||.....: :..:.:...|.|..|.:|||:.
Yeast   245 GQVI----------------TIGNERFRAPEALFHPSVLGLE-SAGIDQTTYNSIMKCDVDVRKE 292

  Fly   315 LYNNIVLSGGSTMFKDFGRRLQRDIKRSVDTRLRISENLSEGRIKPKPIDVQVITHHMQRYAVWF 379
            ||.|||:|||:|||.....|:|::|.                .:.|..:.|::|....::|:||.
Yeast   293 LYGNIVMSGGTTMFPGIAERMQKEIT----------------ALAPSSMKVKIIAPPERKYSVWI 341

  Fly   380 GGSMLASTPEFYQVCHTKAAYEEYGPSICRH 410
            |||:|||...|.|:..:|..|:|.||||..|
Yeast   342 GGSILASLTTFQQMWISKQEYDESGPSIVHH 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp3NP_001261559.1 PTZ00280 2..417 CDD:240343 152/420 (36%)
ACT1NP_116614.1 NBD_sugar-kinase_HSP70_actin 1..375 CDD:418402 153/421 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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