DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp3 and ACTRT3

DIOPT Version :10

Sequence 1:NP_523968.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_115876.3 Gene:ACTRT3 / 84517 HGNCID:24022 Length:372 Species:Homo sapiens


Alignment Length:415 Identity:130/415 - (31%)
Similarity:203/415 - (48%) Gaps:64/415 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 RLPACVIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVGDTNTRRITKGIEDLDFFIGDEAFD 68
            :||. |||.|:|..|.|.||.:|||||.|:.|...:       ...|..:|  .|:..:||:|.|
Human     5 QLPV-VIDNGSGMIKAGVAGCREPQFIYPNIIGRAK-------GQSRAAQG--GLELCVGDQAQD 59

  Fly    69 -ATGYSIKYPVRHGLVEDWDLMERFLEQCVFKY-LRAEPEDHYFLLTEPPLNTPENREYTAEIMF 131
             .:...|.|||..||:..|:.|| .:.:.::.| |:.:|.|...|:|||.||...||:...|:.|
Human    60 WRSSLFISYPVERGLITSWEDME-IMWKHIYDYNLKLKPCDGPVLITEPALNPLANRQQITEMFF 123

  Fly   132 ETFNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIGSCIKHIPIA 196
            |...||..|:::||||||.|:..:        ||:|::||.|||..:|:.|||.:...::.:.:|
Human   124 EHLGVPAFYMSIQAVLALFAAGFT--------TGLVLNSGAGVTQSVPIFEGYCLPHGVQQLDLA 180

  Fly   197 GRNITSFIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKEFAK--------YDTEPGKWI 253
            |.::|:::..|::...:.:......:..:.|||..||:..:..:|.||        |....||.|
Human   181 GLDLTNYLMVLMKNHGIMLLSASDRKIVEDIKESFCYVAMNYEEEMAKKPDCLEKVYQLPDGKVI 245

  Fly   254 RNFSGVNTVTKAPFNVDVGYERFLGPEIFFHPEFSNPDFTIP-LSEIVDNVIQNCPIDVRRPLYN 317
            :                :..:.|..||..|.|...|  ...| :.:|..:.|..|...:|...::
Human   246 Q----------------LHDQLFSCPEALFSPCHMN--LEAPGIDKICFSSIMKCDTGLRNSFFS 292

  Fly   318 NIVLSGGSTMFKDFGRRLQRDIKRSVDTRLRISENLSEGRIKPKPIDVQVITHHMQRYAVWFGGS 382
            ||:|:||||.|....:||.:||                .::.|....||||....::.:||.|||
Human   293 NIILAGGSTSFPGLDKRLVKDI----------------AKVAPANTAVQVIAPPERKISVWMGGS 341

  Fly   383 MLASTPEFYQVCHTKAAYEEYGPSI 407
            :|||...|..:..|.|.::|.||:|
Human   342 ILASLSAFQDMWITAAEFKEVGPNI 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp3NP_523968.1 ASKHA_NBD_Arp3-like 7..410 CDD:466822 128/412 (31%)
ACTRT3NP_115876.3 ASKHA_NBD_actin_Arp-T1-3 7..363 CDD:466848 126/408 (31%)

Return to query results.
Submit another query.