DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp3 and ACT12

DIOPT Version :9

Sequence 1:NP_001261559.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001327017.1 Gene:ACT12 / 823805 AraportID:AT3G46520 Length:377 Species:Arabidopsis thaliana


Alignment Length:412 Identity:155/412 - (37%)
Similarity:212/412 - (51%) Gaps:51/412 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVGDTNTRRITKGIEDLDFFIGDEAFDATG-Y 72
            |.|.|||..|.||||:..|:.:.||.        ||......:..|:...|.::||||....| .
plant    11 VCDNGTGMVKAGFAGDDAPRAVFPSI--------VGRPRHTGVMVGMGQKDAYVGDEAQSKRGIL 67

  Fly    73 SIKYPVRHGLVEDWDLMERFLEQCVFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFETFNVP 137
            ::|||:.||:|.:||.||:......:..||..||:|..||||.|||...|||...:|||||||.|
plant    68 TLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTP 132

  Fly   138 GLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRNITS 202
            .:|:|:||||:|.||       .|| ||||:||||||:|.:|:.|||.:...|..:.:|||::|.
plant   133 AMYVAIQAVLSLYAS-------GRT-TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 189

  Fly   203 FIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKEFAKYDTEPGKWIRNFSGVNTVTKAPF 267
            .:..:|.||..........|..:.:|||..||..|..:|.....|.        |.|....:.|.
plant   190 HLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYEQELETSKTS--------SSVEKSFELPD 246

  Fly   268 N--VDVGYERFLGPEIFFHPE---FSNPDFTIPLSEIVDNVIQNCPIDVRRPLYNNIVLSGGSTM 327
            .  :.:|.|||..||:.|.|.   ..||.    :.|...|.|..|.:|:|:.||.|||||||:||
plant   247 GQVITIGAERFRCPEVLFQPSMIGMENPG----IHETTYNSIMKCDVDIRKDLYGNIVLSGGTTM 307

  Fly   328 FKDFGRRLQRDIKRSVDTRLRISENLSEGRIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQ 392
            |...|.|:.::|.                .:.|..:.::|:....::|:||.|||:|||...|.|
plant   308 FGGIGDRMSKEIT----------------ALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQ 356

  Fly   393 VCHTKAAYEEYGPSICRHNPVF 414
            :...||.|:|.||||. |...|
plant   357 MWIAKAEYDESGPSIV-HRKCF 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp3NP_001261559.1 PTZ00280 2..417 CDD:240343 155/412 (38%)
ACT12NP_001327017.1 NBD_sugar-kinase_HSP70_actin 5..377 CDD:418402 154/410 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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