DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Arp3 and AT2G42170

DIOPT Version :9

Sequence 1:	NP_001261559.1	Gene:	Arp3 / 38898	FlyBaseID:	FBgn0262716	Length:	418	Species:	Drosophila melanogaster
Sequence 2:	NP_001323727.1	Gene:	AT2G42170 / 818817	AraportID:	AT2G42170	Length:	329	Species:	Arabidopsis thaliana

Alignment Length:	364	Identity:	131/364 - (35%)
Similarity:	195/364 - (53%)	Gaps:	40/364 - (10%)

- Green bases have known domain annotations that are detailed below.

  Fly    54 GIEDLDFFIGDEAFDATG-YSIKYPVRHGLVEDWDLMERFLEQCVFKYLRAEPEDHYFLLTEPPL 117
            |:.:.|.|:||:|...:| .::.||:.||:|.:||.||:......:..||..||:|..||||.||
plant     3 GMNENDLFVGDDAEARSGILTLDYPMEHGVVSNWDDMEKIWYHTFYSELRVAPEEHPVLLTEAPL 67

  Fly   118 NTPENREYTAEIMFETFNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAE 182
            |...:||...:||||||.||.:||.:||.|:|.||       .|| ||.|:||||||::::|:.|
plant    68 NPKADREKMTQIMFETFAVPSMYIGMQAALSLHAS-------GRT-TGTVLDSGDGVSYIVPIYE 124

  Fly   183 GYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKEFAKYDT 247
            |..:...|..:.:|||::|:::..::.||  |....:. |..:.|||:..||..|..:|..|
plant   125 GSALPHAILRLDLAGRHLTNYLMKIMMER--GYTSAER-EVVRDIKEQFGYIALDYEQEMEK--- 183

  Fly   248 EPGKWIRNFSGVNTVTKAPFN--VDVGYERFLGPEIFFHPEFSNPDFTIPLSEIVDNVIQNCPID 310
                 ....|.::...:.|..  :.:|.|||..||:.|.|.....: |..:.|...|.|..|..|
plant   184 -----ATKSSAIDRTYELPDGQVITIGAERFRCPEVLFQPSLIGME-TSGIHEKTYNSIMKCDDD 242

  Fly   311 VRRPLYNNIVLSGGSTMFKDFGRRLQRDIKRSVDTRLRISENLSEGRIKPKPIDVQVITHHMQRY 375
            :|:.||.|||||||:|||:....|:.::|.......:||                :::....::|
plant   243 IRKDLYGNIVLSGGTTMFRGIEERMTKEINALAAANMRI----------------KIVAPPERKY 291

  Fly   376 AVWFGGSMLASTPEFYQVCHTKAAYEEYGPSICRHNPVF 414
            :||.|||:|||...:.|:..|||.|||.||:|. |...|
plant   292 SVWIGGSILASLSTYEQMWITKAEYEENGPAIV-HTKCF 329

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Arp3	NP_001261559.1	PTZ00280	2..417	CDD:240343	131/364 (36%)
AT2G42170	NP_001323727.1	None

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5277
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D649708at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	3	2.820