DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp3 and ACTL8

DIOPT Version :9

Sequence 1:NP_001261559.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_110439.2 Gene:ACTL8 / 81569 HGNCID:24018 Length:366 Species:Homo sapiens


Alignment Length:426 Identity:111/426 - (26%)
Similarity:195/426 - (45%) Gaps:87/426 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAGRLPACVIDVGTGYSKLGFAGNKEPQFIIPSAI---AIKES-----ARVGDTNTRRITKGIED 57
            ||.|  ..:||.|:|:.|.|.||..|||.:.|:.:   ..||:     ||      ||::.||  
Human     1 MAAR--TVIIDHGSGFLKAGTAGWNEPQMVFPNIVNYLPCKENPGPSYAR------RRVSLGI-- 55

  Fly    58 LDFFIGDEAFDATGYSIKYPVRHGLVEDWDLMERFLEQCVFKYLRAEPEDHYFLLTEPPLNTPEN 122
             |....|        :..||:..|.:.:|:.:: :|...|.:..|.|.|....::||.||..|.:
Human    56 -DICHPD--------TFSYPIERGRILNWEGVQ-YLWSFVLENHRREQEVPPVIITETPLREPAD 110

  Fly   123 REYTAEIMFETFNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIG 187
            |:...||:||..:||.:.:|.|..::|.||        ..|||:|||||.|:|.|.|..:|..:.
Human   111 RKKMLEILFELLHVPSVLLADQLQMSLYAS--------GLLTGVVVDSGYGLTRVQPFHQGRPLP 167

  Fly   188 SCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAK------------ 240
            :..|.:..||:::::::...|.:.:........|||....:...||:..::.:            
Human   168 ASGKTLEFAGQDLSAYLLKSLFKEDCDRRCLFQLETVAVTQMNKCYVPQNLGEALDFRERQQSAL 232

  Fly   241 -EFAKYDTEPGKWIRNFSGVNTVTKAPFNVDVGYERFLGPEIFFHPE-FSNPDFTIPLSEIVDNV 303
             |...|....|.                .|::...:.:.||:||.|: |..|..:||.: ||::|
Human   233 DESNTYQLPDGS----------------RVELTPMQRVAPEMFFSPQVFEQPGPSIPRA-IVESV 280

  Fly   304 IQNCPIDVRRPLYNNIVLSGGSTMFKDFGRRLQRDIKRSVDTRLRISENLSEGRIKPKPIDVQVI 368
             ::|.|.:|..|.::::..||:|::..|.:||.|::         :.:::|..:       ..|.
Human   281 -ESCEISLRPLLVSHVMACGGNTLYPGFTKRLFREL---------MGDHVSSTK-------ATVW 328

  Fly   369 THHMQRYAVWFGGSMLASTPEFYQVCHTKAAYEEYG 404
            ....:.::||.|.|::|....:.....::   ||||
Human   329 EGSNRNFSVWLGASVVAHLSTYQSEWMSR---EEYG 361

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp3NP_001261559.1 PTZ00280 2..417 CDD:240343 110/425 (26%)
ACTL8NP_110439.2 ACTIN 4..363 CDD:214592 109/423 (26%)
NBD_sugar-kinase_HSP70_actin 7..362 CDD:302596 108/418 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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