DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp3 and Ankrd36

DIOPT Version :9

Sequence 1:NP_001261559.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_076305.2 Gene:Ankrd36 / 76389 MGIID:1923639 Length:1415 Species:Mus musculus


Alignment Length:382 Identity:74/382 - (19%)
Similarity:141/382 - (36%) Gaps:114/382 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 RHGLVEDWDLMERFLEQCVFKYLR-AEPEDHYFLL--TEPPLNTPENREYTAEIMFETFNVPGLY 140
            |.|::|   ..|:.||.|....|. ||..:.|.:|  .:|.::.||......|...:|.:...| 
Mouse   451 REGVLE---FEEKGLEICQDSNLEAAESTESYSILRFAKPDVSDPEPTARKDEYKLDTKDEDRL- 511

  Fly   141 IAVQAVLALAAS--WASRSA------EERTLTGIVVDSG---DGVTHVIPVAEGYVIGSCIKHIP 194
              .:.:||..||  .|.:::      :||: .|..:|:.   :..:.:...|:|.::|.      
Mouse   512 --ERHLLAPKASQHQAKQTSPPPVQLQERS-QGPEMDTASDEEDTSGLSKSAKGQILGG------ 567

  Fly   195 IAGRNITSFIQSLLREREVGIPPEQSLETAKAI----KEKHCYICPDI-AKEFAKYDTEPGKWIR 254
                           :..:|..|| ..||.:.:    .:|...|..|: |..:.|.:..|     
Mouse   568 ---------------KLTLGENPE-GKETVQCVINKPTQKGDEIYEDVNANVYLKEERPP----- 611

  Fly   255 NFSGVNTVTKAPFNVDVGYERFLGPEIFFHPEFSNPDFTIPLSEIVDNVIQNCP----------- 308
            :.||...:|..|  ..:.|..|         :..:.|.:   :.:|...:|..|           
Mouse   612 DVSGKTHLTSDP--TTLAYNMF---------DCGDRDVS---AALVSVTLQTSPRQEEGGLGNAF 662

  Fly   309 --------ID------VRRPLYNNIV--LSGGSTMFKDFGRRLQRDIKRSVDTR--------LRI 349
                    :|      .:.||..|.:  .:..|.:.:.|.:|.::..| ::::|        :|:
Mouse   663 PSPSSSQDVDYSGQSLTKFPLMRNKLDCENNASELGESFHKRKEKSSK-NIESRKVKGKCPEVRM 726

  Fly   350 SE--------NLSEGRIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKA 398
            .|        :.|:..:|||..|.|:...||.:.:   ..:.|::..|...|...|:
Mouse   727 GEKQEGHEFKSQSQKTMKPKRTDWQLDIRHMLKSS---DANRLSNAKERSHVTEVKS 780

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp3NP_001261559.1 PTZ00280 2..417 CDD:240343 74/382 (19%)
Ankrd36NP_076305.2 Ank_2 37..130 CDD:289560
ANK repeat 37..64 CDD:293786
ANK 61..186 CDD:238125
ANK repeat 68..97 CDD:293786
ANK repeat 99..130 CDD:293786
ANK repeat 132..163 CDD:293786
Ank_2 137..229 CDD:289560
ANK 162..>240 CDD:238125
ANK repeat 165..196 CDD:293786
ANK repeat 198..229 CDD:293786
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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