DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp3 and POTEF

DIOPT Version :9

Sequence 1:NP_001261559.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster
Sequence 2:XP_016860322.1 Gene:POTEF / 728378 HGNCID:33905 Length:1085 Species:Homo sapiens


Alignment Length:402 Identity:140/402 - (34%)
Similarity:206/402 - (51%) Gaps:44/402 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVGDTNTRRITKGIEDLDFFIGDEAFDATG-Y 72
            |||.|:|..|.||||:..|:.:.||.        ||....:.:..|:...:.::|.||....| .
Human   719 VIDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRQQGMMGGMHQKESYVGKEAQSKRGIL 775

  Fly    73 SIKYPVRHGLVEDWDLMERFLEQCVFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFETFNVP 137
            ::|||:.||::.:||.||:......:..||..||:|..||||..||...|||...:|||||||.|
Human   776 TLKYPMEHGIITNWDDMEKIWHHTFYNELRVAPEEHPVLLTEATLNPKANREKMTQIMFETFNTP 840

  Fly   138 GLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRNITS 202
            .:|:|:||||:|..|       .|| ||||:||||||||.:|:.||..:......:.:|||.:..
Human   841 AMYVAIQAVLSLYTS-------GRT-TGIVMDSGDGVTHTVPIYEGNALPHATLRLDLAGRELPD 897

  Fly   203 FIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKEFAKYDTEPGKWIRNFSGVNTVTKAPF 267
            ::..:|.|...........|..:.||||.||:..|..:|.|.        :.:.|.:....:.|.
Human   898 YLMKILTEHGYRFTTMAEREIVRDIKEKLCYVALDFEQEMAT--------VASSSSLEKSYELPD 954

  Fly   268 N--VDVGYERFLGPEIFFHPEFSNPDFTIPLSEIVDNVIQNCPIDVRRPLYNNIVLSGGSTMFKD 330
            .  :.:|.|||..||..|.|.|...: :..:.|...|.|....:|:|:.||.|.|||||:||:..
Human   955 GQVITIGNERFRCPEALFQPCFLGME-SCGIHETTFNSIMKSDVDIRKDLYTNTVLSGGTTMYPG 1018

  Fly   331 FGRRLQRDIKRSVDTRLRISENLSEGRIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCH 395
            ...|:|::|                ..:.|..:.:::|....::|:||.|||:|||...|.|:..
Human  1019 MAHRMQKEI----------------AALAPSMMKIRIIAPPKRKYSVWVGGSILASLSTFQQMWI 1067

  Fly   396 TKAAYEEYGPSI 407
            :|..|:|.||||
Human  1068 SKQEYDESGPSI 1079

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp3NP_001261559.1 PTZ00280 2..417 CDD:240343 140/402 (35%)
POTEFXP_016860322.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.920

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