DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp3 and Actl9

DIOPT Version :9

Sequence 1:NP_001261559.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_899105.2 Gene:Actl9 / 69481 MGIID:1916731 Length:415 Species:Mus musculus


Alignment Length:417 Identity:125/417 - (29%)
Similarity:205/417 - (49%) Gaps:56/417 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAG-RLP----ACVIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVGDTNTRRITKGIEDLDF 60
            |.| |||    |.|||:|||..|:||||..:|.:.:.:.:        |....::.||...:|:.
Mouse    39 MVGDRLPPKTGAVVIDMGTGTCKVGFAGQSQPTYTVATIL--------GCQPKKQATKDQSELET 95

  Fly    61 FIGDEAFDATGYSIKYPVRHGLVEDWDLMERFLEQCVFKYLRAEPEDHYFLLTEPPLNTPENREY 125
            |||:.|.......:..|:|:|:|.||:..|......:...|:....:|..|.::||.:...|||.
Mouse    96 FIGEAARSRPELRLVKPIRNGIVVDWEAAELIWRHILEHDLQVATHEHPLLFSDPPFSPATNREK 160

  Fly   126 TAEIMFETFNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIGSCI 190
            ..|:.||:.:.|.||:|.|:||::.|        ...:.|:|||:|.||::.:||.:||.:...|
Mouse   161 LVEVAFESLHSPALYVASQSVLSVYA--------HGRVNGLVVDTGHGVSYTVPVVQGYNLPHAI 217

  Fly   191 KHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKEFAKYDTEPGKWIRN 255
            :.:.:||.::|:|:..:|......: .::.|:..:.||..:||:.||..||.|:.|.|..:.::.
Mouse   218 QRLDLAGNHLTAFLAEMLLGSGFSL-QQEDLDLVENIKHHYCYLAPDFQKEQARPDEECKQSLKL 281

  Fly   256 FSGVNTVTKAPFNVDVGYERFLGPEIFFHPEFSNPDF----TIPLSEIVDNVIQNCPIDVRRPLY 316
            ..| .|||       :|.|.|..||:.|||    |:.    .|.|..:.:..:...|.::|..:.
Mouse   282 PDG-RTVT-------LGKELFQCPELLFHP----PEIPGLSPIGLPAMAEQSLLKVPQELRPHVA 334

  Fly   317 NNIVLSGGSTMFKDFGRRLQRDIKRSVDTRLRISENLSEGRIKPKPID-VQVITHHMQRYAVWFG 380
            .|::|.|||::|.....|.:.::..|:                 .|.| |.|:.|..:..:||.|
Mouse   335 RNVILCGGSSLFTGLEGRFRAELLHSL-----------------SPEDHVVVMAHPNRNLSVWIG 382

  Fly   381 GSMLASTPEFYQVCHTKAAYEEYGPSI 407
            ||:|||...|......:..|||.||.:
Mouse   383 GSILASLHAFQSCWVLREQYEERGPQV 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp3NP_001261559.1 PTZ00280 2..417 CDD:240343 124/416 (30%)
Actl9NP_899105.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..22
ACTIN 48..414 CDD:214592 120/408 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.910

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