DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp3 and actb2

DIOPT Version :10

Sequence 1:NP_523968.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_853632.3 Gene:actb2 / 57935 ZFINID:ZDB-GENE-000329-3 Length:375 Species:Danio rerio


Alignment Length:425 Identity:153/425 - (36%)
Similarity:217/425 - (51%) Gaps:61/425 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAGRLPACVIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVGDTNTRRITKGIEDLDFFIGDE 65
            |...:.|.|:|.|:|..|.||||:..|:.:.||.        ||....:.:..|:...|.::|||
Zfish     1 MDDEIAALVVDNGSGMCKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDE 57

  Fly    66 AFDATG-YSIKYPVRHGLVEDWDLMERFLEQCVFKYLRAEPEDHYFLLTEPPLNTPENREYTAEI 129
            |....| .::|||:.||:|.:||.||:......:..||..||:|..||||.|||...|||...:|
Zfish    58 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQI 122

  Fly   130 MFETFNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIGSCIKHIP 194
            ||||||.|.:|:|:||||:|.||       .|| ||||:||||||||.:|:.|||.:...|..:.
Zfish   123 MFETFNTPAMYVAIQAVLSLYAS-------GRT-TGIVMDSGDGVTHTVPIYEGYALPHAILRLD 179

  Fly   195 IAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKEFA----------KYDTEP 249
            :|||::|.::..:|.||..........|..:.||||.||:..|..:|..          .|:...
Zfish   180 LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYELPD 244

  Fly   250 GKWIRNFSGVNTVTKAPFNVDVGYERFLGPEIFFHPEFSNPDFTIPLSEIVDNVIQNCPIDVRRP 314
            |:.|                .:|.|||..||..|.|.|...: :..:.|...|.|..|.:|:|:.
Zfish   245 GQVI----------------TIGNERFRCPEALFQPSFLGME-SCGIHETTFNSIMKCDVDIRKD 292

  Fly   315 LYNNIVLSGGSTMFKDFGRRLQRDIKRSVDTRLRISENLSEGRIKPKPIDVQVITHHMQRYAVWF 379
            ||.|.|||||:||:.....|:|::|.                .:.|..:.:::|....::|:||.
Zfish   293 LYANTVLSGGTTMYPGIADRMQKEIT----------------SLAPSTMKIKIIAPPERKYSVWI 341

  Fly   380 GGSMLASTPEFYQVCHTKAAYEEYGPSICRHNPVF 414
            |||:|||...|.|:..:|..|:|.||||. |...|
Zfish   342 GGSILASLSTFQQMWISKQEYDESGPSIV-HRKCF 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp3NP_523968.1 ASKHA_NBD_Arp3-like 7..410 CDD:466822 150/413 (36%)
actb2NP_853632.3 ASKHA_NBD_actin 6..370 CDD:466823 149/412 (36%)

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