DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp3 and Actl6a

DIOPT Version :10

Sequence 1:NP_523968.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_062647.2 Gene:Actl6a / 56456 MGIID:1861453 Length:429 Species:Mus musculus


Alignment Length:462 Identity:122/462 - (26%)
Similarity:200/462 - (43%) Gaps:118/462 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ACVIDVGTGYSKLGFAGNKEPQFIIPSAIAI--------------KESARVG------DTNTRRI 51
            |.|.|:|:...:.|:||...|:...|:||.:              .:..:.|      |||..|:
Mouse    13 ALVFDIGSYTVRAGYAGEDCPKVDFPTAIGVVLERDDGSTMMEIDGDKGKQGGPTYYIDTNALRV 77

  Fly    52 TKGIEDLDFFIGDEAFDATGYSIKYPVRHGLVEDWDLMERFLEQCVFKYLRAEPEDHYFLLTEPP 116
            .:           |..:|..     |:::|:|||||..:..|:.....::::|...|..|::|.|
Mouse    78 PR-----------ENMEAIS-----PLKNGMVEDWDSFQAILDHTYKMHVKSEASLHPVLMSEAP 126

  Fly   117 LNTPENREYTAEIMFETFNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVA 181
            .||...||...|:|||.:::|..::...|||...|:..|        ||:::|||...|..|||.
Mouse   127 WNTRAKREKLTELMFEHYSIPAFFLCKTAVLTAFANGRS--------TGLILDSGATHTTAIPVH 183

  Fly   182 EGYVIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAI----------KEK------ 230
            :|||:...|...|:||..||...:.|.:|..:.:.|...:.:.:|:          |||      
Mouse   184 DGYVLQQGIVKSPLAGDFITMQCRELFQEMNIELIPPYMIASKEAVREGSPANWKRKEKLPQVTR 248

  Fly   231 --HCYICPDIAKEF---------AKYDTEPGKWIRNFSGVNTVTKAP---------FNVDVGYER 275
              |.|:|..:.::|         :.||.:            ...:.|         :|.|.|.||
Mouse   249 SWHNYMCNCVIQDFQASVLQVSDSTYDEQ------------VAAQMPTVHYEFPNGYNCDFGAER 301

  Fly   276 FLGPEIFFHPEFSN-----PDFTIPLSEIVDNVIQNCPIDVRRPLYNNIVLSGGSTMFKDFGRRL 335
            ...||..|.|  ||     .:..:.:|.:|...:..|.||:|..||.:::::||:|:.:.|..||
Mouse   302 LKIPEGLFDP--SNVKGLSGNTMLGVSHVVTTSVGMCDIDIRPGLYGSVIVAGGNTLIQSFTDRL 364

  Fly   336 QRDIKRSVDTRLR---ISENLSEGRIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTK 397
            .|::.:.....:|   |:.|.:..|                |::.|.|||:|||...|.|:..:|
Mouse   365 NRELSQKTPPSMRLKLIANNTTVER----------------RFSSWIGGSILASLGTFQQMWISK 413

  Fly   398 AAYEEYG 404
            ..|||.|
Mouse   414 QEYEEGG 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp3NP_523968.1 ASKHA_NBD_Arp3-like 7..410 CDD:466822 122/462 (26%)
Actl6aNP_062647.2 ASKHA_NBD_Arp4_ACTL6-like 8..420 CDD:466846 121/460 (26%)

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