DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp3 and ACTL6B

DIOPT Version :9

Sequence 1:NP_001261559.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_057272.1 Gene:ACTL6B / 51412 HGNCID:160 Length:426 Species:Homo sapiens


Alignment Length:447 Identity:116/447 - (25%)
Similarity:195/447 - (43%) Gaps:91/447 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ACVIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVG-----------------DTNTRRITKG 54
            |.|.|:|:...:.|:||...|:...|:.:.:..:...|                 |||...:.: 
Human    13 ALVFDIGSFSVRAGYAGEDCPKADFPTTVGLLAAEEGGGLELEGDKEKKGKIFHIDTNALHVPR- 76

  Fly    55 IEDLDFFIGDEAFDATGYSIKYPVRHGLVEDWDLMERFLEQCVFKYLRAEPEDHYFLLTEPPLNT 119
                           .|..:..|:::|::|||:.....|:....|::::||..|..|::|.|.||
Human    77 ---------------DGAEVMSPLKNGMIEDWECFRAILDHTYSKHVKSEPNLHPVLMSEAPWNT 126

  Fly   120 PENREYTAEIMFETFNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGY 184
            ...||...|:|||.:|:|..::...|||...|:..|        ||:|:|||...|..|||.:||
Human   127 RAKREKLTELMFEQYNIPAFFLCKTAVLTAFANGRS--------TGLVLDSGATHTTAIPVHDGY 183

  Fly   185 VIGSCIKHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAI----------KEK--------H 231
            |:...|...|:||..|:...:.|.:|..:.|.|...:...:.:          |||        |
Human   184 VLQQGIVKSPLAGDFISMQCRELFQEMAIDIIPPYMIAAKEPVREGAPPNWKKKEKLPQVSKSWH 248

  Fly   232 CYICPDIAKEF---------AKYDTEPGKWIRNFSGVNTVTKAPFNVDVGYERFLGPEIFFHPEF 287
            .|:|.::.::|         :.||.:..   .....|:......:|.|.|.||...||..|.|  
Human   249 NYMCNEVIQDFQASVLQVSDSPYDEQVA---AQMPTVHYEMPNGYNTDYGAERLRIPEGLFDP-- 308

  Fly   288 SN-----PDFTIPLSEIVDNVIQNCPIDVRRPLYNNIVLSGGSTMFKDFGRRLQRDIKRSVDTRL 347
            ||     .:..:.:..:|...|..|.||:|..||.:::::||:|:.:.|..||.|::.:.....:
Human   309 SNVKGLSGNTMLGVGHVVTTSIGMCDIDIRPGLYGSVIVTGGNTLLQGFTDRLNRELSQKTPPSM 373

  Fly   348 RISENLSEGRIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFYQVCHTKAAYEEYG 404
            |:....|...::             ::::.|.|||:|||...|.|:..:|..|||.|
Human   374 RLKLIASNSTME-------------RKFSPWIGGSILASLGTFQQMWISKQEYEEGG 417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp3NP_001261559.1 PTZ00280 2..417 CDD:240343 116/447 (26%)
ACTL6BNP_057272.1 Actin 11..426 CDD:394979 116/447 (26%)
Essential for mediating its function in dendritic development, may contribute to neuronal-specific targeting. /evidence=ECO:0000250|UniProtKB:Q99MR0 39..82 5/58 (9%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D649708at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.910

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