DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp3 and zgc:101810

DIOPT Version :10

Sequence 1:NP_523968.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001007773.1 Gene:zgc:101810 / 493612 ZFINID:ZDB-GENE-041121-7 Length:394 Species:Danio rerio


Alignment Length:428 Identity:147/428 - (34%)
Similarity:217/428 - (50%) Gaps:74/428 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 AGRLPACVIDVGTGYSKLGFAGNKEPQFIIPSAIA---IKESARVGDTNTRRITKGIEDLDFFIG 63
            ||| ...|.|.|||:.|.||||:..|..|.|:.:.   |:...:||         .||..|..:|
Zfish     4 AGR-KVIVCDNGTGFVKCGFAGSNFPDHIFPALVGRPIIRSDTKVG---------SIEIKDLMVG 58

  Fly    64 DEAFDATG-YSIKYPVRHGLVEDWDLMERFLEQCVF--KYLRAEPEDHYFLLTEPPLNTPENREY 125
            |||.:... ..:.||:.:|:|..|:.|....:. .|  :.|...|.|...||||||:|..:||:.
Zfish    59 DEASECRSMLEVTYPMENGMVRSWEDMIHLWDH-TFGPQRLNISPPDCKVLLTEPPMNPMKNRQK 122

  Fly   126 TAEIMFETFNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIGSCI 190
            .||:||||:...|:|:|:||||.|.|        :..|||:|:||||||||:.||.||:.:....
Zfish   123 IAEVMFETYRFHGIYVAIQAVLTLYA--------QGLLTGVVIDSGDGVTHICPVYEGFSLPHLT 179

  Fly   191 KHIPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKE----------FAKY 245
            :.:.||||:||.::..||..|..........||.:.:|||.|::..:|.:|          ...|
Zfish   180 RRLDIAGRDITRYLIKLLLLRGYAFNHTADFETVRMMKEKLCFVGYNIEQEQQLANETTVLVESY 244

  Fly   246 DTEPGKWIRNFSGVNTVTKAPFNVDVGYERFLGPEIFFHPEFSNPDFTIPLSEIVDNVIQNCPID 310
            ....|:.||                ||.|||..||..|.|...|.: .:.::|::.|.||...||
Zfish   245 MLPDGRMIR----------------VGGERFGAPEALFQPHLVNVE-GVGVAELLFNTIQAADID 292

  Fly   311 VRRPLYNNIVLSGGSTMFKDFGRRLQRDIKRSVDTRL--RISENLSEGRIK----PKPIDVQVIT 369
            :|..||.:|||||||||:.....||:|:||:....|:  ..:|.||:.:|:    |:        
Zfish   293 LRADLYKHIVLSGGSTMYPGLPSRLEREIKQLYLERVLKGDTEKLSKFKIRIEDPPR-------- 349

  Fly   370 HHMQRYAVWFGGSMLAS---TPEFYQVCHTKAAYEEYG 404
               :::.|:.||::||:   ..|.:.:  ::|.|||.|
Zfish   350 ---RKHMVFMGGAVLANIMKDKESFWL--SRAEYEEKG 382

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp3NP_523968.1 ASKHA_NBD_Arp3-like 7..410 CDD:466822 144/423 (34%)
zgc:101810NP_001007773.1 ASKHA_NBD_Arp2 7..388 CDD:466821 144/424 (34%)

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