DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp3 and actrt2

DIOPT Version :10

Sequence 1:NP_523968.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001006111.1 Gene:actrt2 / 448563 XenbaseID:XB-GENE-22041684 Length:375 Species:Xenopus tropicalis


Alignment Length:406 Identity:133/406 - (32%)
Similarity:207/406 - (50%) Gaps:48/406 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 PACVIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVGDTNTRRITKGIEDLDFFIGDEAFDAT 70
            ||.:.|:|:|..|.|.:|...|..::||.        ||..:.|....|.....:::|:.|....
 Frog    10 PAVIFDIGSGNCKAGMSGEDLPTAVVPSV--------VGHLSDRSAMLGAGQQPYYVGEMAMSKR 66

  Fly    71 G-YSIKYPVRHGLVEDWDLMERFLEQCVFKY-LRAEPEDHYFLLTEPPLNTPENREYTAEIMFET 133
            . ..:.:|::.|:|:.||.|.: :.:.::|| |:....:|...|||.|||...||...|||.||.
 Frog    67 AILDLVFPIKEGIVKSWDNMIK-IWKYLYKYELKKPSSEHPVFLTEAPLNPLRNRHKMAEIFFEN 130

  Fly   134 FNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIGSCIKHIPIAGR 198
            ||||.:|::.||.|||.||..:        ||||:|.|.|:||.:.:.:|..:...:..:|:|||
 Frog   131 FNVPAMYVSHQANLALYASGLT--------TGIVLDVGAGITHTVAIYDGVALPHAVSKLPVAGR 187

  Fly   199 NITSFIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKEFAKYDTEPGKWIRNFSGVNTVT 263
            .||.::..||.|...........|..:.||||.|||..|.:   |:|:..|....:.:      |
 Frog   188 TITQYLMKLLTENGYNFITAAEREIVRDIKEKLCYIALDPS---AEYERNPKDITKEY------T 243

  Fly   264 KAPFNV-DVGYERFLGPEIFFHPEFSNPDFTIP-LSEIVDNVIQNCPIDVRRPLYNNIVLSGGST 326
            ....|| .:..:.|..||..|.|  ||.....| :..:::|:||.||||:||.|.:|:|||||||
 Frog   244 LPDGNVIKIDSQLFRAPEALFSP--SNIGLEAPGVQGLINNIIQKCPIDIRRALLSNVVLSGGST 306

  Fly   327 MFKDFGRRLQRDIKRSVDTRLRISENLSEGRIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEFY 391
            :|..|..|:.|::::..                |..:.::|:....::|:||.|.|:|:|...|.
 Frog   307 LFPGFDERVLRELEKKA----------------PDGVQIKVLAATDRKYSVWIGASVLSSMDSFK 355

  Fly   392 QVCHTKAAYEEYGPSI 407
            :....|:.|:|:||||
 Frog   356 ENWIRKSEYDEFGPSI 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp3NP_523968.1 ASKHA_NBD_Arp3-like 7..410 CDD:466822 132/405 (33%)
actrt2NP_001006111.1 ASKHA_NBD_actin_Arp-T1-3 10..368 CDD:466848 129/401 (32%)

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