DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp3 and actr2a

DIOPT Version :10

Sequence 1:NP_523968.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_998664.1 Gene:actr2a / 406820 ZFINID:ZDB-GENE-040426-2894 Length:394 Species:Danio rerio


Alignment Length:420 Identity:140/420 - (33%)
Similarity:212/420 - (50%) Gaps:65/420 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VIDVGTGYSKLGFAGNKEPQFIIPSAIA---IKESARVGDTNTRRITKGIEDLDFFIGDEAFDAT 70
            |.|.|||:.|.|:||:..|:.|.|:.:.   |:.:|:||:         ||..|..:||||.:..
Zfish    10 VCDNGTGFVKCGYAGSNFPEHIFPALVGRPIIRSTAKVGN---------IEIKDLMVGDEASELR 65

  Fly    71 G-YSIKYPVRHGLVEDWDLMERFLEQCVF--KYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFE 132
            . ..:.||:.:|:|.:||.| :.|....|  :.|..:..:...||||||:|..:|||...|:|||
Zfish    66 SMLEVNYPMENGIVRNWDDM-KHLWDYTFGPEKLNIDSRNCKILLTEPPMNPTKNREKIIEVMFE 129

  Fly   133 TFNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIGSCIKHIPIAG 197
            |:...|:|||:||||.|.|        :..|||:||||||||||:.||.||:.:....:.:.|||
Zfish   130 TYQFSGVYIAIQAVLTLYA--------QGLLTGVVVDSGDGVTHICPVYEGFSLPHLTRRLDIAG 186

  Fly   198 RNITSFIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKE----------FAKYDTEPGKW 252
            |:||.::..||..|..........||.:.:|||.||:..:|.:|          ...|....|:.
Zfish   187 RDITRYLIKLLLLRGYAFNHSADFETVRMMKEKLCYVGYNIEQEQKLALETTVLVESYTLPDGRV 251

  Fly   253 IRNFSGVNTVTKAPFNVDVGYERFLGPEIFFHPEFSNPDFTIPLSEIVDNVIQNCPIDVRRPLYN 317
            |:                ||.|||..||..|.|...|.: .:.::|::.|.||...||.|...|.
Zfish   252 IK----------------VGGERFGAPEALFQPHLINVE-GVGVAELLFNTIQAADIDTRAEFYK 299

  Fly   318 NIVLSGGSTMFKDFGRRLQRDIKRSVDTRLRISENLSEGRI-KPKPIDVQVITHHMQRYAVWFGG 381
            :|||||||||:.....||:|::|:      ...|.:.:|.: |.....:::.....:::.|:.||
Zfish   300 HIVLSGGSTMYPGLPSRLERELKQ------LYLERVLKGDVDKLSKFKIRIEDPPRRKHMVFLGG 358

  Fly   382 SMLA----STPEFYQVCHTKAAYEEYGPSI 407
            ::||    ....|:.   |:..|:|.|..:
Zfish   359 AVLADIMKDKDNFWM---TREEYQEKGTRV 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp3NP_523968.1 ASKHA_NBD_Arp3-like 7..410 CDD:466822 140/420 (33%)
actr2aNP_998664.1 ASKHA_NBD_Arp2 7..388 CDD:466821 140/420 (33%)

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