DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp3 and actr3

DIOPT Version :9

Sequence 1:NP_001261559.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001003944.1 Gene:actr3 / 406250 ZFINID:ZDB-GENE-040428-2 Length:418 Species:Danio rerio


Alignment Length:418 Identity:336/418 - (80%)
Similarity:377/418 - (90%) Gaps:0/418 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAGRLPACVIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVGDTNTRRITKGIEDLDFFIGDE 65
            ||.||||||:|.||||:|||:|||.||||||||.|||||||:|||...||:.||::||||:||||
Zfish     1 MAARLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRMMKGVDDLDFYIGDE 65

  Fly    66 AFDATGYSIKYPVRHGLVEDWDLMERFLEQCVFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIM 130
            |.|...|:.|:|:|||:||||||||||:||.:|||||||||||||||||||||||||||||||||
Zfish    66 AIDKPTYATKWPIRHGIVEDWDLMERFMEQVIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIM 130

  Fly   131 FETFNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIGSCIKHIPI 195
            ||:||||||||||||||||||||.||...||||||.|:|||||||||||||||||||||||||||
Zfish   131 FESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPI 195

  Fly   196 AGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKEFAKYDTEPGKWIRNFSGVN 260
            |||:||.|.|.||||||||||||||||||||:||:..|:|||:.|||:||||:..|||:.::|:|
Zfish   196 AGRDITYFTQQLLREREVGIPPEQSLETAKAVKERFSYVCPDLVKEFSKYDTDGSKWIKQYTGIN 260

  Fly   261 TVTKAPFNVDVGYERFLGPEIFFHPEFSNPDFTIPLSEIVDNVIQNCPIDVRRPLYNNIVLSGGS 325
            |::|..|.:||||||||||||||||||:|||||.|:||:||.||||||||||||||.||||||||
Zfish   261 TISKKEFTIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGS 325

  Fly   326 TMFKDFGRRLQRDIKRSVDTRLRISENLSEGRIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEF 390
            |||:|||||||||:||:||.||::||.||.|::||||||||||||||||||||||||||||||||
Zfish   326 TMFRDFGRRLQRDLKRTVDARLKLSEELSGGKLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEF 390

  Fly   391 YQVCHTKAAYEEYGPSICRHNPVFGTMT 418
            |||||||..|||.||||||||||||.|:
Zfish   391 YQVCHTKKDYEEIGPSICRHNPVFGVMS 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp3NP_001261559.1 PTZ00280 2..417 CDD:240343 334/414 (81%)
actr3NP_001003944.1 PTZ00280 2..417 CDD:240343 334/414 (81%)
COG5277 6..410 CDD:227602 324/403 (80%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170595839
Domainoid 1 1.000 376 1.000 Domainoid score I825
eggNOG 1 0.900 - - E1_COG5277
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H68483
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D286999at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1671
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
87.710

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