DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arp3 and actr3

DIOPT Version :10

Sequence 1:NP_523968.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_989368.1 Gene:actr3 / 394999 XenbaseID:XB-GENE-5915063 Length:418 Species:Xenopus tropicalis


Alignment Length:418 Identity:338/418 - (80%)
Similarity:377/418 - (90%) Gaps:0/418 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAGRLPACVIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVGDTNTRRITKGIEDLDFFIGDE 65
            ||.||||||:|.||||:|||:|||.||||||||.|||||||:|||...||:.||::||||.||||
 Frog     1 MAARLPACVVDCGTGYTKLGYAGNTEPQFIIPSCIAIKESAKVGDQAQRRLMKGVDDLDFHIGDE 65

  Fly    66 AFDATGYSIKYPVRHGLVEDWDLMERFLEQCVFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIM 130
            |.|...|:.|:|:|||:||||||||||:||.:|||||||||||||||||||||||||||||||||
 Frog    66 AIDKPTYATKWPIRHGIVEDWDLMERFMEQIIFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIM 130

  Fly   131 FETFNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIGSCIKHIPI 195
            ||:||||||||||||||||||||.||...||||||.|:|||||||||||||||||||||||||||
 Frog   131 FESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGTVIDSGDGVTHVIPVAEGYVIGSCIKHIPI 195

  Fly   196 AGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKEFAKYDTEPGKWIRNFSGVN 260
            |||:||.|||.|||:||||||||||||||||:||:..|:|||:.|||:||||:..|||:.::|||
 Frog   196 AGRDITYFIQQLLRDREVGIPPEQSLETAKAVKERFSYVCPDLVKEFSKYDTDGAKWIKQYTGVN 260

  Fly   261 TVTKAPFNVDVGYERFLGPEIFFHPEFSNPDFTIPLSEIVDNVIQNCPIDVRRPLYNNIVLSGGS 325
            .|:|..|::||||||||||||||||||:|||||.|:||:||.||||||||||||||.||||||||
 Frog   261 AVSKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGS 325

  Fly   326 TMFKDFGRRLQRDIKRSVDTRLRISENLSEGRIKPKPIDVQVITHHMQRYAVWFGGSMLASTPEF 390
            |||:|||||||||:||:||.||::||.||.||:||||||||||||||||||||||||||||||||
 Frog   326 TMFRDFGRRLQRDVKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLASTPEF 390

  Fly   391 YQVCHTKAAYEEYGPSICRHNPVFGTMT 418
            |||||||..|||.||||||||||||.|:
 Frog   391 YQVCHTKKDYEEIGPSICRHNPVFGVMS 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp3NP_523968.1 ASKHA_NBD_Arp3-like 7..410 CDD:466822 325/402 (81%)
actr3NP_989368.1 ASKHA_NBD_Arp3-like 7..410 CDD:466822 325/402 (81%)

Return to query results.
Submit another query.