DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp3 and actc1

DIOPT Version :10

Sequence 1:NP_523968.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_989094.1 Gene:actc1 / 394698 XenbaseID:XB-GENE-480347 Length:377 Species:Xenopus tropicalis


Alignment Length:419 Identity:154/419 - (36%)
Similarity:215/419 - (51%) Gaps:61/419 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ACVIDVGTGYSKLGFAGNKEPQFIIPSAIAIKESARVGDTNTRRITKGIEDLDFFIGDEAFDATG 71
            |.|.|.|:|..|.||||:..|:.:.||.        ||....:.:..|:...|.::||||....|
 Frog     9 ALVCDNGSGLVKAGFAGDDAPRAVFPSI--------VGRPRHQGVMVGMGQKDSYVGDEAQSKRG 65

  Fly    72 -YSIKYPVRHGLVEDWDLMERFLEQCVFKYLRAEPEDHYFLLTEPPLNTPENREYTAEIMFETFN 135
             .::|||:.||::.:||.||:......:..||..||:|..||||.|||...|||...:|||||||
 Frog    66 ILTLKYPIEHGIITNWDDMEKIWHHTFYNELRVAPEEHPTLLTEAPLNPKANREKMTQIMFETFN 130

  Fly   136 VPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRNI 200
            ||.:|:|:||||:|.||       .|| ||||:||||||||.:|:.|||.:...|..:.:|||::
 Frog   131 VPAMYVAIQAVLSLYAS-------GRT-TGIVLDSGDGVTHNVPIYEGYALPHAIMRLDLAGRDL 187

  Fly   201 TSFIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKEFA----------KYDTEPGKWIRN 255
            |.::..:|.||..........|..:.||||.||:..|...|.|          .|:...|:.|  
 Frog   188 TDYLMKILTERGYSFVTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQVI-- 250

  Fly   256 FSGVNTVTKAPFNVDVGYERFLGPEIFFHPEFSNPDFTIPLSEIVDNVIQNCPIDVRRPLYNNIV 320
                          .:|.|||..||..|.|.|...: :..:.|...|.|..|.||:|:.||.|.|
 Frog   251 --------------TIGNERFRCPETLFQPSFIGME-SAGIHETTYNSIMKCDIDIRKDLYANNV 300

  Fly   321 LSGGSTMFKDFGRRLQRDIKRSVDTRLRISENLSEGRIKPKPIDVQVITHHMQRYAVWFGGSMLA 385
            ||||:||:.....|:|::|.                .:.|..:.:::|....::|:||.|||:||
 Frog   301 LSGGTTMYPGIADRMQKEIT----------------ALAPSTMKIKIIAPPERKYSVWIGGSILA 349

  Fly   386 STPEFYQVCHTKAAYEEYGPSICRHNPVF 414
            |...|.|:..:|..|:|.||||. |...|
 Frog   350 SLSTFQQMWISKQEYDEAGPSIV-HRKCF 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp3NP_523968.1 ASKHA_NBD_Arp3-like 7..410 CDD:466822 152/413 (37%)
actc1NP_989094.1 ASKHA_NBD_actin 8..372 CDD:466823 151/411 (37%)

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