DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arp3 and Actrt3

DIOPT Version :10

Sequence 1:NP_523968.1 Gene:Arp3 / 38898 FlyBaseID:FBgn0262716 Length:418 Species:Drosophila melanogaster
Sequence 2:NP_001102412.1 Gene:Actrt3 / 365763 RGDID:1561457 Length:371 Species:Rattus norvegicus


Alignment Length:418 Identity:130/418 - (31%)
Similarity:203/418 - (48%) Gaps:64/418 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MAGRLPACVIDVGTGYSKLGFAGNKEPQFIIPSAIA-IKESARVGDTNTRRITKGIEDLDFFIGD 64
            |:...|..|||.|:|..|.|.||.:||||:.|:.:. .|..:...|:..          :..:||
  Rat     1 MSSYQPPVVIDNGSGMIKAGLAGAREPQFVYPNILGRTKNHSPAADSKQ----------ELRVGD 55

  Fly    65 EAFDATGY-SIKYPVRHGLVEDWDLMERFLEQCVFKY-LRAEPEDHYFLLTEPPLNTPENREYTA 127
            :|.:...: ||.|||..||:..|..|| .:.:.::.| |...|.|...|:|||.||...:|::.:
  Rat    56 QAQERRSFLSISYPVERGLISSWGDME-IMWKHIYDYNLNLNPSDGPVLVTEPALNPLADRQHIS 119

  Fly   128 EIMFETFNVPGLYIAVQAVLALAASWASRSAEERTLTGIVVDSGDGVTHVIPVAEGYVIGSCIKH 192
            |:.||...||..|::|||||||.|:..:        ||:|::||.|:|..:|:.|||.:...:|.
  Rat   120 EVFFENLGVPAFYMSVQAVLALFAAGFT--------TGLVLNSGAGITQCVPIFEGYCLSHGVKQ 176

  Fly   193 IPIAGRNITSFIQSLLREREVGIPPEQSLETAKAIKEKHCYICPDIAKEFAK-------YDTEPG 250
            :.:||.::|:::..||::..:.:......:|...|||..||:..:..:|..|       |....|
  Rat   177 LNVAGIDLTNYLMMLLKDDGIMLLRTGDRKTVTDIKENACYVAMNYDEEMVKESNVEKMYTLPDG 241

  Fly   251 KWIRNFSGVNTVTKAPFNVDVGYERFLGPEIFFHPEFSNPDFTIP-LSEIVDNVIQNCPIDVRRP 314
            |.::       :.|..|..         ||..|.|...|.|  .| :..|..:.|..|..|:|..
  Rat   242 KTVK-------LRKQVFRC---------PEALFSPYLVNVD--APGIDRICFSSIMKCDADLRNS 288

  Fly   315 LYNNIVLSGGSTMFKDFGRRLQRDIKRSVDTRLRISENLSEGRIKPKPIDVQVITHHMQRYAVWF 379
            .::||:||||||.|....:||.:|:                .::.|....|||:....::.:||.
  Rat   289 FFSNIILSGGSTSFPGLDKRLIKDV----------------AKLAPANTTVQVVAPPERKISVWM 337

  Fly   380 GGSMLASTPEFYQVCHTKAAYEEYGPSI 407
            |||:|||...|..:..|.|.:||.||:|
  Rat   338 GGSILASLSAFQDMWITAAEFEEVGPNI 365

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arp3NP_523968.1 ASKHA_NBD_Arp3-like 7..410 CDD:466822 128/412 (31%)
Actrt3NP_001102412.1 ASKHA_NBD_actin_Arp-T1-3 6..362 CDD:466848 126/408 (31%)

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